Pattern-Oriented Ensemble Modeling System


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Documentation for package ‘poems’ version 1.3.1

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DispersalFriction R6 class representing a dispersal friction.
DispersalGenerator R6 class representing a dispersal generator.
DispersalTemplate R6 class representing a nested container for dispersal generator attributes
GenerativeTemplate R6 class representing a nested container for generator attributes
Generator R6 class representing a dynamic attribute generator
GenericClass R6 class with generic reusable functionality
GenericManager R6 class representing a generic manager.
GenericModel R6 class representing a generic model.
LatinHypercubeSampler R6 class to represent a Latin hypercube sampler.
ModelSimulator R6 class representing a model simulator.
poems poems: Pattern-oriented ensemble modeling and simulation
PopulationModel R6 class representing a population model
PopulationResults R6 class representing population simulator results.
population_density Nested functions for population density dependence.
population_dispersal Nested functions for population dispersal.
population_env_stoch Nested functions for population environmental stochasticity.
population_results Nested functions for initializing, calculating and collecting population simulator results.
population_simulator Runs a stage-based demographic population model simulation.
population_transformation Nested functions for a user-defined population abundance (and capacity) transformation.
population_transitions Nested functions for stage-based population transitions.
Region R6 class representing a study region.
ResultsManager R6 class representing a results manager.
SimulationManager R6 class representing a simulation manager.
SimulationModel R6 class representing a simulation model
SimulationResults R6 class representing simulation results.
SimulatorReference R6 class for a simulator reference
SpatialCorrelation R6 class representing a spatial correlation.
SpatialModel R6 class representing a spatial model
tasmania_ibra_data Thylacine vignette Tasmania IBRA data
tasmania_ibra_raster Thylacine vignette Tasmania IBRA raster
tasmania_modifier Tasmania land-use modifier raster
tasmania_raster Thylacine vignette Tasmania raster
thylacine_bounty_record Thylacine vignette bounty record
thylacine_example_matrices Thylacine vignette demonstration example matrices
thylacine_example_matrices_rerun Thylacine vignette demonstration example (re-run) matrices
thylacine_example_metrics Thylacine vignette demonstration example metrics
thylacine_example_metrics_rerun Thylacine vignette demonstration example (re-run) metrics
thylacine_hs_raster Thylacine vignette habitat suitability raster
Validator R6 class representing a pattern-oriented validator.