Bayesian Multi-State Models for Early Oncology

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Documentation for package ‘oncomsm’ version 0.1.4

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

oncomsm-package	The oncomsm package
check_data	Check a visits data set for correct format
compute_pfs	Compute progression-free-survival rate given sample
create_srpmodel	A stable-response-progression model
define_srp_prior	A stable-response-progression model
format.srpmodel	Print an srpmodel
impute	Sample visits from predictive distribution
oncomsm	The oncomsm package
parameter_sample_to_tibble	Convert parameter sample to data table
plot.srpmodel	Summary plot of model prior
plot_mstate	Swimmer plot of multi-state data
plot_pfs	Plot progression-free-survival function
plot_response_probability	Plot the response probability distributions
plot_transition_times	Plot the transition times of a model
print.srpmodel	Print an srpmodel
sample_posterior	Sample parameters from a model
sample_predictive	Sample visits from predictive distribution
sample_prior	Sample parameters from a model
simulate_decision_rule	Simulate results under a custom decision rule
srp-model	A stable-response-progression model
srpmodel	A stable-response-progression model
visits_to_mstate	Convert cross-sectional visit data to multi-state format