CRAN Package Check Results for Maintainer ‘Julian Friedrich <julian.friedrich at medma.uni-heidelberg.de>’

Last updated on 2025-10-31 13:51:23 CET.

Package	ERROR	OK
miRetrieve	9	4

Package miRetrieve

Current CRAN status: ERROR: 9, OK: 4

Version: 1.3.4
Check: tests
Result: ERROR Running ‘testthat.R’ [35s/42s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(miRetrieve) > > test_check("miRetrieve") [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ─── `plot_lda` has type 'object', not 'list'. ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ────── typeof(plot_target) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ──────────────────── typeof(plot_animal) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ──────────────────── typeof(plot_patients) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ──────────────────── typeof(plot_biomarker) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ──────────────────── typeof(plot_own) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.3.4
Check: tests
Result: ERROR Running ‘testthat.R’ [23s/28s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(miRetrieve) > > test_check("miRetrieve") [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ─── `plot_lda` has type 'object', not 'list'. ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ────── typeof(plot_target) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ──────────────────── typeof(plot_animal) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ──────────────────── typeof(plot_patients) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ──────────────────── typeof(plot_biomarker) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ──────────────────── typeof(plot_own) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3.4
Check: tests
Result: ERROR Running ‘testthat.R’ [59s/76s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(miRetrieve) > > test_check("miRetrieve") [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ─── `plot_lda` has type 'object', not 'list'. ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ────── typeof(plot_target) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ──────────────────── typeof(plot_animal) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ──────────────────── typeof(plot_patients) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ──────────────────── typeof(plot_biomarker) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ──────────────────── typeof(plot_own) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.3.4
Check: tests
Result: ERROR Running ‘testthat.R’ [57s/68s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(miRetrieve) > > test_check("miRetrieve") [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ─── `plot_lda` has type 'object', not 'list'. ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ────── typeof(plot_target) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ──────────────────── typeof(plot_animal) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ──────────────────── typeof(plot_patients) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ──────────────────── typeof(plot_biomarker) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ──────────────────── typeof(plot_own) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.3.4
Check: tests
Result: ERROR Running 'testthat.R' [28s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(miRetrieve) > > test_check("miRetrieve") [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ─── `plot_lda` has type 'object', not 'list'. ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ────── typeof(plot_target) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ──────────────────── typeof(plot_animal) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ──────────────────── typeof(plot_patients) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ──────────────────── typeof(plot_biomarker) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ──────────────────── typeof(plot_own) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64

Version: 1.3.4
Check: tests
Result: ERROR Running ‘testthat.R’ [34s/46s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(miRetrieve) > > test_check("miRetrieve") [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ─── `plot_lda` has type 'object', not 'list'. ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ────── typeof(plot_target) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ──────────────────── typeof(plot_animal) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ──────────────────── typeof(plot_patients) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ──────────────────── typeof(plot_biomarker) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ──────────────────── typeof(plot_own) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64

Version: 1.3.4
Check: tests
Result: ERROR Running ‘testthat.R’ [34s/42s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(miRetrieve) > > test_check("miRetrieve") [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ─── `plot_lda` has type 'object', not 'list'. ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ────── typeof(plot_target) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ──────────────────── typeof(plot_animal) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ──────────────────── typeof(plot_patients) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ──────────────────── typeof(plot_biomarker) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ──────────────────── typeof(plot_own) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] Error: Test failures Execution halted Flavor: r-release-linux-x86_64

Version: 1.3.4
Check: tests
Result: ERROR Running 'testthat.R' [29s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(miRetrieve) > > test_check("miRetrieve") [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ─── `plot_lda` has type 'object', not 'list'. ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ────── typeof(plot_target) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ──────────────────── typeof(plot_animal) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ──────────────────── typeof(plot_patients) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ──────────────────── typeof(plot_biomarker) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ──────────────────── typeof(plot_own) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] Error: Test failures Execution halted Flavor: r-release-windows-x86_64

Version: 1.3.4
Check: tests
Result: ERROR Running 'testthat.R' [39s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(miRetrieve) > > test_check("miRetrieve") [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ─── `plot_lda` has type 'object', not 'list'. ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ────── typeof(plot_target) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ──────────────────── typeof(plot_animal) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ──────────────────── typeof(plot_patients) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ──────────────────── typeof(plot_biomarker) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ──────────────────── typeof(plot_own) not equal to "list". 1/1 mismatches x[1]: "object" y[1]: "list" [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64