Last updated on 2025-07-08 01:48:52 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 13.96 | 194.30 | 208.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.75 | 263.18 | 273.93 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 365.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 89.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 184.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 146.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 232.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [58s/58s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.126, system: 0.024, elapsed: 1.151 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 6.590, system: 0.019, elapsed: 6.609 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.146, system: 0.010, elapsed: 0.158 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 2.561, system: 0.129, elapsed: 2.690 seconds]
Computing values for grid cells...
... done. [user: 0.121, system: 0.002, elapsed: 0.123 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 10.964, system: 0.203, elapsed: 11.168 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.129, system: 0.018, elapsed: 1.147 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 6.663, system: 0.018, elapsed: 6.683 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.144, system: 0.008, elapsed: 0.151 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 2.557, system: 0.112, elapsed: 2.669 seconds]
Computing values for grid cells...
... done. [user: 0.138, system: 0.002, elapsed: 0.140 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 11.037, system: 0.169, elapsed: 11.208 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.186, system: 0.017, elapsed: 1.204 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 6.557, system: 0.020, elapsed: 6.577 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.140, system: 0.007, elapsed: 0.146 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 2.549, system: 0.129, elapsed: 2.679 seconds]
Computing values for grid cells...
... done. [user: 0.120, system: 0.002, elapsed: 0.121 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 0.898, system: 0.150, elapsed: 0.652 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 11.931, system: 0.343, elapsed: 11.879 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.147, system: 0.019, elapsed: 1.167 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 6.503, system: 0.019, elapsed: 6.523 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.140, system: 0.007, elapsed: 0.148 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 2.553, system: 0.126, elapsed: 2.679 seconds]
Computing values for grid cells...
... done. [user: 0.140, system: 0.002, elapsed: 0.143 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 8.569, system: 0.335, elapsed: 8.907 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.550, system: 0.530, elapsed: 20.084 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/94s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.473, system: 0.039, elapsed: 1.611 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.432, system: 0.063, elapsed: 8.814 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.166, system: 0.010, elapsed: 0.178 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.101, system: 0.150, elapsed: 3.268 seconds]
Computing values for grid cells...
... done. [user: 0.153, system: 0.003, elapsed: 0.161 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 13.820, system: 0.284, elapsed: 14.578 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.446, system: 0.035, elapsed: 1.541 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.060, system: 0.094, elapsed: 11.424 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.198 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.427, system: 0.150, elapsed: 3.712 seconds]
Computing values for grid cells...
... done. [user: 0.153, system: 0.003, elapsed: 0.160 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.792, system: 0.314, elapsed: 17.600 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.567, system: 0.033, elapsed: 1.930 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.970, system: 0.073, elapsed: 12.983 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.226 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.422, system: 0.168, elapsed: 4.486 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.208 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.062, system: 0.244, elapsed: 0.926 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.979, system: 0.554, elapsed: 21.485 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.031, elapsed: 2.153 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.996, system: 0.067, elapsed: 13.398 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.244 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.510, system: 0.190, elapsed: 4.125 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.002, elapsed: 0.165 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.191, system: 0.608, elapsed: 12.976 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.184, system: 0.941, elapsed: 33.929 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64