Last updated on 2025-10-31 13:50:54 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.75 | 244.69 | 257.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.45 | 253.33 | 263.78 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.93 | 258.75 | 273.68 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 199.00 | 211.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 210.00 | 223.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/148s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.644, system: 0.044, elapsed: 3.011 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.496, system: 0.069, elapsed: 15.574 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.014, elapsed: 0.318 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.970, system: 0.204, elapsed: 7.211 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.345 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.058, system: 0.361, elapsed: 27.443 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.592, system: 0.035, elapsed: 2.928 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.552, system: 0.089, elapsed: 16.002 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.905, system: 0.182, elapsed: 5.448 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.978, system: 0.340, elapsed: 25.988 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.632, system: 0.038, elapsed: 2.560 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.648, system: 0.086, elapsed: 15.451 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.374 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.966, system: 0.200, elapsed: 7.472 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.003, elapsed: 0.272 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.251, system: 0.228, elapsed: 1.201 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.517, system: 0.594, elapsed: 28.400 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.038, elapsed: 2.778 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.465, system: 0.089, elapsed: 18.236 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.014, elapsed: 0.518 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.959, system: 0.185, elapsed: 10.714 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.426 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.963, system: 0.499, elapsed: 23.684 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.034, system: 0.868, elapsed: 57.859 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/124s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.609, system: 0.047, elapsed: 2.647 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.467, system: 0.072, elapsed: 14.068 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.013, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.188, elapsed: 5.850 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.007, elapsed: 0.259 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.760, system: 0.351, elapsed: 24.093 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.649, system: 0.036, elapsed: 2.434 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.514, system: 0.103, elapsed: 14.519 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.378 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.848, system: 0.171, elapsed: 6.144 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.277 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.938, system: 0.368, elapsed: 24.737 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.630, system: 0.040, elapsed: 2.456 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.357, system: 0.095, elapsed: 11.508 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.011, elapsed: 0.345 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.816, system: 0.190, elapsed: 5.959 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.014, elapsed: 0.305 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.135, system: 0.238, elapsed: 1.151 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.958, system: 0.625, elapsed: 22.775 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.562, system: 0.030, elapsed: 2.078 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.411, system: 0.078, elapsed: 14.797 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.331 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.742, system: 0.173, elapsed: 6.230 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.229 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.654, system: 0.482, elapsed: 18.973 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.388, system: 0.801, elapsed: 43.602 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64