Last updated on 2025-11-28 00:49:57 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.46 | 252.28 | 264.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.06 | 252.90 | 263.96 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.60 | 241.19 | 256.79 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 18.00 | 263.00 | 281.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 27.00 | 321.00 | 348.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [93s/193s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.995, system: 0.149, elapsed: 4.949 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.038, system: 0.444, elapsed: 20.348 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.022, elapsed: 0.450 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.159, system: 0.352, elapsed: 9.033 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.013, elapsed: 0.296 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.214, system: 1.042, elapsed: 36.737 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.815, system: 0.116, elapsed: 5.929 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.123, system: 0.447, elapsed: 27.245 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.028, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.465, system: 0.495, elapsed: 8.930 seconds]
Computing values for grid cells...
... done. [user: 0.197, system: 0.016, elapsed: 0.330 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.410, system: 1.163, elapsed: 44.286 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.028, system: 0.148, elapsed: 3.299 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.002, system: 0.470, elapsed: 19.599 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.023, elapsed: 0.589 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.345, system: 0.362, elapsed: 10.330 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.034, elapsed: 0.771 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.239, system: 0.287, elapsed: 2.168 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.712, system: 1.394, elapsed: 38.307 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.668, system: 0.064, elapsed: 4.442 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.981, system: 0.265, elapsed: 20.376 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.020, elapsed: 0.380 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.254, system: 0.318, elapsed: 9.558 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.008, elapsed: 0.459 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.408, system: 0.738, elapsed: 23.948 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.402, system: 1.468, elapsed: 60.751 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [92s/233s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.749, system: 0.095, elapsed: 5.679 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.989, system: 0.271, elapsed: 29.268 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.021, elapsed: 0.525 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.884, system: 0.240, elapsed: 8.010 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.008, elapsed: 0.267 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.657, system: 0.928, elapsed: 46.181 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.858, system: 0.090, elapsed: 5.312 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.188, system: 0.400, elapsed: 24.984 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.034, elapsed: 0.492 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.302, system: 0.374, elapsed: 14.110 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.399 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.396, system: 1.218, elapsed: 47.567 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.693, system: 0.055, elapsed: 3.354 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.206, system: 0.419, elapsed: 32.260 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.033, elapsed: 0.415 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.189, system: 0.364, elapsed: 10.003 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.009, elapsed: 0.352 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.158, system: 0.294, elapsed: 1.593 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.375, system: 1.477, elapsed: 50.036 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.837, system: 0.081, elapsed: 5.378 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.853, system: 0.188, elapsed: 23.787 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.023, elapsed: 0.456 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.163, system: 0.345, elapsed: 11.214 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.007, elapsed: 0.503 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.325, system: 0.900, elapsed: 28.844 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.248, system: 1.593, elapsed: 72.110 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64