CRAN Package Check Results for Maintainer ‘Pendy Tok <pendytok0518 at gmail.com>’

Last updated on 2025-09-13 00:51:25 CEST.

Package	ERROR	OK
vDiveR	4	9

Package vDiveR

Current CRAN status: ERROR: 4, OK: 9

Version: 2.0.1
Check: examples
Result: ERROR Running examples in ‘vDiveR-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: plot_conservation_level > ### Title: Conservation Levels Distribution Plot > ### Aliases: plot_conservation_level > > ### ** Examples > > plot_conservation_level(proteins_1host, conservation_label = 1,alpha=0.8, base_size = 15) Ignoring unknown labels: • fill : "Conservation level" Error in `geom_half_point()`: ! Problem while converting geom to grob. ℹ Error occurred in the 2nd layer. Caused by error in `fun()`: ! argument "layout" is missing, with no default Backtrace: ▆ 1. ├─base (local) `<fn>`(x) 2. ├─ggplot2 (local) `print.ggplot2::ggplot`(x) 3. │ ├─ggplot2::ggplot_gtable(data) 4. │ └─ggplot2 (local) `ggplot_gtable.ggplot2::ggplot_built`(data) 5. │ └─ggplot2:::by_layer(...) 6. │ ├─rlang::try_fetch(...) 7. │ │ ├─base::tryCatch(...) 8. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 9. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 10. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 11. │ │ └─base::withCallingHandlers(...) 12. │ └─ggplot2 (local) f(l = layers[[i]], d = data[[i]]) 13. │ └─l$draw_geom(d, layout) 14. │ └─ggplot2 (local) draw_geom(..., self = self) 15. │ └─self$geom$draw_layer(...) 16. │ └─ggplot2 (local) draw_layer(..., self = self) 17. │ └─base::lapply(...) 18. │ └─ggplot2 (local) FUN(X[[i]], ...) 19. │ ├─rlang::inject(self$draw_panel(data, panel_params, coord, !!!params)) 20. │ └─self$draw_panel(...) 21. │ └─ggplot2 (local) draw_panel(..., self = self) 22. │ └─base::lapply(...) 23. │ └─ggplot2 (local) FUN(X[[i]], ...) 24. │ └─self$draw_group(group, panel_params, coord, ...) 25. │ └─gghalves (local) draw_group(...) 26. │ └─transformation$compute_layer(transformation_df, transformation_params_new) 27. │ └─ggplot2 (local) compute_layer(..., self = self) 28. │ └─ggplot2:::dapply(...) 29. │ └─base::lapply(...) 30. │ └─ggplot2 (local) FUN(X[[i]], ...) 31. │ └─ggplot2 (local) apply_fun(cur_data) 32. │ └─ggplot2 (local) fun(x, ...) 33. └─rlang (local) `<fn>`(`<gtvrErrr>`) 34. └─handlers[[1L]](cnd) 35. └─cli::cli_abort(...) 36. └─rlang::abort(...) Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2.0.1
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘maps’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 2.0.1
Check: examples
Result: ERROR Running examples in ‘vDiveR-Ex.R’ failed The error most likely occurred in: > ### Name: plot_conservation_level > ### Title: Conservation Levels Distribution Plot > ### Aliases: plot_conservation_level > > ### ** Examples > > plot_conservation_level(proteins_1host, conservation_label = 1,alpha=0.8, base_size = 15) Ignoring unknown labels: • fill : "Conservation level" Error in `geom_half_point()`: ! Problem while converting geom to grob. ℹ Error occurred in the 2nd layer. Caused by error in `fun()`: ! argument "layout" is missing, with no default Backtrace: ▆ 1. ├─base (local) `<fn>`(x) 2. ├─ggplot2 (local) `print.ggplot2::ggplot`(x) 3. │ ├─ggplot2::ggplot_gtable(data) 4. │ └─ggplot2 (local) `ggplot_gtable.ggplot2::ggplot_built`(data) 5. │ └─ggplot2:::by_layer(...) 6. │ ├─rlang::try_fetch(...) 7. │ │ ├─base::tryCatch(...) 8. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 9. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 10. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 11. │ │ └─base::withCallingHandlers(...) 12. │ └─ggplot2 (local) f(l = layers[[i]], d = data[[i]]) 13. │ └─l$draw_geom(d, layout) 14. │ └─ggplot2 (local) draw_geom(..., self = self) 15. │ └─self$geom$draw_layer(...) 16. │ └─ggplot2 (local) draw_layer(..., self = self) 17. │ └─base::lapply(...) 18. │ └─ggplot2 (local) FUN(X[[i]], ...) 19. │ ├─rlang::inject(self$draw_panel(data, panel_params, coord, !!!params)) 20. │ └─self$draw_panel(...) 21. │ └─ggplot2 (local) draw_panel(..., self = self) 22. │ └─base::lapply(...) 23. │ └─ggplot2 (local) FUN(X[[i]], ...) 24. │ └─self$draw_group(group, panel_params, coord, ...) 25. │ └─gghalves (local) draw_group(...) 26. │ └─transformation$compute_layer(transformation_df, transformation_params_new) 27. │ └─ggplot2 (local) compute_layer(..., self = self) 28. │ └─ggplot2:::dapply(...) 29. │ └─base::lapply(...) 30. │ └─ggplot2 (local) FUN(X[[i]], ...) 31. │ └─ggplot2 (local) apply_fun(cur_data) 32. │ └─ggplot2 (local) fun(x, ...) 33. └─rlang (local) `<fn>`(`<gtvrErrr>`) 34. └─handlers[[1L]](cnd) 35. └─cli::cli_abort(...) 36. └─rlang::abort(...) Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc