Last updated on 2026-03-30 12:53:10 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.1 | 13.93 | 378.52 | 392.45 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.5.1 | 10.54 | 257.59 | 268.13 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.5.1 | 24.00 | 546.97 | 570.97 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.5.1 | 24.00 | 547.10 | 571.10 | ERROR | |
| r-devel-macos-arm64 | 0.5.1 | 3.00 | 81.00 | 84.00 | OK | |
| r-devel-windows-x86_64 | 0.5.1 | 16.00 | 344.00 | 360.00 | OK | |
| r-patched-linux-x86_64 | 0.5.1 | 15.69 | 350.45 | 366.14 | OK | |
| r-release-linux-x86_64 | 0.5.1 | 12.05 | 354.60 | 366.65 | OK | |
| r-release-macos-arm64 | 0.5.1 | 3.00 | 79.00 | 82.00 | OK | |
| r-release-macos-x86_64 | 0.5.1 | 9.00 | 393.00 | 402.00 | OK | |
| r-release-windows-x86_64 | 0.5.1 | 16.00 | 326.00 | 342.00 | OK | |
| r-oldrel-macos-arm64 | 0.5.1 | 3.00 | 85.00 | 88.00 | OK | |
| r-oldrel-macos-x86_64 | 0.5.1 | 9.00 | 420.00 | 429.00 | OK | |
| r-oldrel-windows-x86_64 | 0.5.1 | 22.00 | 435.00 | 457.00 | OK |
Version: 0.5.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [180s/274s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(simDAG)
> library(testthat)
> library(data.table)
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
> library(igraph)
Attaching package: 'igraph'
The following object is masked from 'package:testthat':
compare
The following objects are masked from 'package:stats':
decompose, spectrum
The following object is masked from 'package:base':
union
> library(ggdag)
Attaching package: 'ggdag'
The following object is masked from 'package:stats':
filter
>
> data.table::setDTthreads(1)
>
> test_check("simDAG")
Saving _problems/test_network-458.R
Saving _problems/test_node_lmer-15.R
Saving _problems/test_node_lmer-46.R
Saving _problems/test_node_lmer-79.R
Saving _problems/test_node_lmer-172.R
Saving _problems/test_node_lmer-202.R
Saving _problems/test_node_lmer-233.R
Saving _problems/test_node_lmer-266.R
Saving _problems/test_node_lmer-294.R
Saving _problems/test_node_lmer-308.R
Saving _problems/test_node_lmer-363.R
Saving _problems/test_node_lmer-387.R
t = 1 node = sickness2
t = 1 node = sickness1
t = 2 node = sickness2
t = 2 node = sickness1
t = 3 node = sickness2
t = 3 node = sickness1
t = 4 node = sickness2
t = 4 node = sickness1
t = 5 node = sickness2
t = 5 node = sickness1
starting worker pid=1814937 on localhost:11312 at 00:13:18.863
starting worker pid=1814938 on localhost:11312 at 00:13:18.964
|
| | 0%Loading required package: simDAG
loaded simDAG and set parent environment
Loading required package: simDAG
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
loaded simDAG and set parent environment
Loading required package: foreach
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: rngtools
Loading required package: foreach
Loading required package: rngtools
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|======================================================================| 100%starting worker pid=1815597 on localhost:11312 at 00:13:25.470
starting worker pid=1815598 on localhost:11312 at 00:13:25.559
Loading required package: simDAG
loaded simDAG and set parent environment
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: simDAG
Loading required package: foreach
loaded simDAG and set parent environment
Loading required package: rngtools
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: rngtools
starting worker pid=1817009 on localhost:11312 at 00:13:34.283
starting worker pid=1817008 on localhost:11312 at 00:13:34.307
Loading required package: simDAG
Loading required package: simDAG
loaded simDAG and set parent environment
loaded simDAG and set parent environment
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: rngtools
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: rngtools
starting worker pid=1818924 on localhost:11312 at 00:13:44.829
starting worker pid=1818925 on localhost:11312 at 00:13:44.942
|
| | 0%Loading required package: simDAG
loaded simDAG and set parent environment
Loading required package: simDAG
loaded simDAG and set parent environment
Attaching package: ‘data.table’
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: foreach
Loading required package: rngtools
Loading required package: rngtools
|
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|======================================================================| 100%starting worker pid=1820870 on localhost:11312 at 00:13:53.543
starting worker pid=1820869 on localhost:11312 at 00:13:53.663
|
| | 0%Loading required package: simDAG
Loading required package: simDAG
loaded simDAG and set parent environment
loaded simDAG and set parent environment
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: rngtools
Loading required package: rngtools
|
|=================================== | 50%
|
|======================================================================| 100%starting worker pid=1821835 on localhost:11312 at 00:14:00.435
starting worker pid=1821834 on localhost:11312 at 00:14:00.460
|
| | 0%Loading required package: simDAG
loaded simDAG and set parent environment
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: simDAG
Loading required package: rngtools
loaded simDAG and set parent environment
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: rngtools
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 12 | WARN 14 | SKIP 56 | PASS 1026 ]
══ Skipped tests (56) ══════════════════════════════════════════════════════════
• On CRAN (56): 'test_DAG.network_S3.r:4:1', 'test_DAG.network_S3.r:10:1',
'test_DAG.network_S3.r:18:1', 'test_DAG.network_S3.r:24:1',
'test_DAG.network_S3.r:32:1', 'test_DAG.network_S3.r:44:1',
'test_DAG.network_S3.r:50:1', 'test_DAG.network_S3.r:58:1',
'test_DAG.network_S3.r:64:1', 'test_DAG.network_S3.r:72:1',
'test_DAG.node_S3.r:4:1', 'test_DAG.node_S3.r:9:1',
'test_DAG.node_S3.r:14:1', 'test_DAG.node_S3.r:19:1',
'test_DAG.node_S3.r:24:1', 'test_DAG.node_S3.r:32:1',
'test_DAG.node_S3.r:37:1', 'test_DAG.node_S3.r:42:1',
'test_DAG.node_S3.r:47:1', 'test_DAG.node_S3.r:52:1', 'test_dag.r:14:1',
'test_dag.r:21:1', 'test_dag.r:34:1', 'test_dag.r:44:1', 'test_dag.r:51:1',
'test_dag.r:64:1', 'test_node.r:548:1', 'test_node_rsurv.r:99:3',
'test_plot.DAG.r:11:1', 'test_plot.DAG.r:15:1', 'test_plot.DAG.r:19:1',
'test_plot.DAG.r:23:1', 'test_plot.DAG.r:27:1', 'test_plot.DAG.r:31:1',
'test_plot.DAG.r:35:1', 'test_plot.DAG.r:40:1', 'test_plot.DAG.r:44:1',
'test_plot.DAG.r:52:1', 'test_plot.DAG.r:59:1', 'test_plot.DAG.r:64:1',
'test_plot.DAG.r:69:1', 'test_plot.DAG.r:100:1', 'test_plot.DAG.r:104:1',
'test_plot.DAG.r:108:1', 'test_plot.simDT.r:24:1', 'test_plot.simDT.r:28:1',
'test_plot.simDT.r:32:1', 'test_plot.simDT.r:36:1', 'test_plot.simDT.r:40:1',
'test_plot.simDT.r:48:1', 'test_plot.simDT.r:56:1', 'test_simDT_S3.r:11:1',
'test_simDT_S3.r:15:1', 'test_simDT_S3.r:20:1', 'test_simDT_S3.r:25:1',
'test_sim_discrete_event.r:693:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_network.r:458:3'): mixing net() and mixed terms in formula syntax ──
Expected `round(mean(data$Y), 3)` to equal `-5.302`.
Differences:
`actual`: -5.3000
`expected`: -5.3020
── Failure ('test_node_lmer.r:15:3'): simple random effect ─────────────────────
Expected `round(mean(data$Y), 3)` to equal `-1.995`.
Differences:
`actual`: -1.9900
`expected`: -1.9950
── Failure ('test_node_lmer.r:46:3'): simple random effect in disrete-time simulation ──
Expected `round(mean(data$Y), 3)` to equal `-1.864`.
Differences:
`actual`: -1.852
`expected`: -1.864
── Failure ('test_node_lmer.r:79:3'): simple random effect + categorical fixed effect ──
Expected `round(mean(data$Y), 3)` to equal `-0.519`.
Differences:
`actual`: -0.5130
`expected`: -0.5190
── Failure ('test_node_lmer.r:172:3'): simple random effect + cubic terms ──────
Expected `round(mean(data$Y), 3)` to equal `-1.802`.
Differences:
`actual`: -1.7970
`expected`: -1.8020
── Failure ('test_node_lmer.r:202:3'): simple random effect + ONLY cubic terms ──
Expected `round(mean(data$Y), 3)` to equal `-1.856`.
Differences:
`actual`: -1.8510
`expected`: -1.8560
── Failure ('test_node_lmer.r:233:3'): multiple random effects ─────────────────
Expected `round(mean(data$Y), 3)` to equal `-2.178`.
Differences:
`actual`: -2.1790
`expected`: -2.1780
── Failure ('test_node_lmer.r:266:3'): with random effects and random slopes ───
Expected `round(mean(data$Y), 3)` to equal `-1.979`.
Differences:
`actual`: -1.9740
`expected`: -1.9790
── Failure ('test_node_lmer.r:294:3'): mixed model term with + in it ───────────
Expected `round(mean(data$Y), 3)` to equal `-2.361`.
Differences:
`actual`: -2.3650
`expected`: -2.3610
── Failure ('test_node_lmer.r:308:3'): works with function input ───────────────
Expected `round(mean(data$Y), 3)` to equal `-2.361`.
Differences:
`actual`: -2.3650
`expected`: -2.3610
── Failure ('test_node_lmer.r:363:3'): random effects with net() syntax ────────
Expected `round(mean(data$Y), 3)` to equal `-5.3`.
Differences:
`actual`: -5.2990
`expected`: -5.3000
── Failure ('test_node_lmer.r:387:3'): simple random effect with non-default link ──
Expected `round(mean(data$Y), 3)` to equal `-1.995`.
Differences:
`actual`: -1.9900
`expected`: -1.9950
[ FAIL 12 | WARN 14 | SKIP 56 | PASS 1026 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.5.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [177s/212s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(simDAG)
> library(testthat)
> library(data.table)
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
> library(igraph)
Attaching package: 'igraph'
The following object is masked from 'package:testthat':
compare
The following objects are masked from 'package:stats':
decompose, spectrum
The following object is masked from 'package:base':
union
> library(ggdag)
Attaching package: 'ggdag'
The following object is masked from 'package:stats':
filter
>
> data.table::setDTthreads(1)
>
> test_check("simDAG")
Saving _problems/test_network-458.R
Saving _problems/test_node_lmer-15.R
Saving _problems/test_node_lmer-46.R
Saving _problems/test_node_lmer-79.R
Saving _problems/test_node_lmer-172.R
Saving _problems/test_node_lmer-202.R
Saving _problems/test_node_lmer-233.R
Saving _problems/test_node_lmer-266.R
Saving _problems/test_node_lmer-294.R
Saving _problems/test_node_lmer-308.R
Saving _problems/test_node_lmer-363.R
Saving _problems/test_node_lmer-387.R
t = 1 node = sickness2
t = 1 node = sickness1
t = 2 node = sickness2
t = 2 node = sickness1
t = 3 node = sickness2
t = 3 node = sickness1
t = 4 node = sickness2
t = 4 node = sickness1
t = 5 node = sickness2
t = 5 node = sickness1
starting worker pid=1087697 on localhost:11486 at 14:33:30.720
starting worker pid=1087698 on localhost:11486 at 14:33:30.728
|
| | 0%Loading required package: simDAG
Loading required package: simDAG
loaded simDAG and set parent environment
loaded simDAG and set parent environment
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: rngtools
Loading required package: rngtools
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|
|======================================================================| 100%starting worker pid=1088728 on localhost:11486 at 14:33:35.485
starting worker pid=1088729 on localhost:11486 at 14:33:35.491
Loading required package: simDAG
loaded simDAG and set parent environment
Loading required package: simDAG
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
loaded simDAG and set parent environment
Loading required package: foreach
Attaching package: ‘data.table’
Loading required package: rngtools
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: rngtools
starting worker pid=1089687 on localhost:11486 at 14:33:42.100
starting worker pid=1089688 on localhost:11486 at 14:33:42.128
Loading required package: simDAG
loaded simDAG and set parent environment
Loading required package: simDAG
Attaching package: ‘data.table’
loaded simDAG and set parent environment
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: rngtools
Loading required package: foreach
Loading required package: rngtools
starting worker pid=1091038 on localhost:11486 at 14:33:49.569
starting worker pid=1091039 on localhost:11486 at 14:33:49.569
|
| | 0%Loading required package: simDAG
Loading required package: simDAG
loaded simDAG and set parent environment
loaded simDAG and set parent environment
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Attaching package: ‘data.table’
Loading required package: foreach
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: rngtools
Loading required package: rngtools
|
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|
|======================================================================| 100%starting worker pid=1091637 on localhost:11486 at 14:33:55.701
starting worker pid=1091638 on localhost:11486 at 14:33:55.701
|
| | 0%Loading required package: simDAG
Loading required package: simDAG
loaded simDAG and set parent environment
loaded simDAG and set parent environment
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: foreach
Loading required package: rngtools
Loading required package: rngtools
|
|=================================== | 50%
|
|======================================================================| 100%starting worker pid=1092185 on localhost:11486 at 14:34:00.875
starting worker pid=1092186 on localhost:11486 at 14:34:00.876
|
| | 0%Loading required package: simDAG
loaded simDAG and set parent environment
Loading required package: simDAG
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
loaded simDAG and set parent environment
Loading required package: rngtools
Attaching package: ‘data.table’
The following object is masked from ‘package:base’:
%notin%
Loading required package: foreach
Loading required package: rngtools
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 12 | WARN 14 | SKIP 56 | PASS 1026 ]
══ Skipped tests (56) ══════════════════════════════════════════════════════════
• On CRAN (56): 'test_DAG.network_S3.r:4:1', 'test_DAG.network_S3.r:10:1',
'test_DAG.network_S3.r:18:1', 'test_DAG.network_S3.r:24:1',
'test_DAG.network_S3.r:32:1', 'test_DAG.network_S3.r:44:1',
'test_DAG.network_S3.r:50:1', 'test_DAG.network_S3.r:58:1',
'test_DAG.network_S3.r:64:1', 'test_DAG.network_S3.r:72:1',
'test_DAG.node_S3.r:4:1', 'test_DAG.node_S3.r:9:1',
'test_DAG.node_S3.r:14:1', 'test_DAG.node_S3.r:19:1',
'test_DAG.node_S3.r:24:1', 'test_DAG.node_S3.r:32:1',
'test_DAG.node_S3.r:37:1', 'test_DAG.node_S3.r:42:1',
'test_DAG.node_S3.r:47:1', 'test_DAG.node_S3.r:52:1', 'test_dag.r:14:1',
'test_dag.r:21:1', 'test_dag.r:34:1', 'test_dag.r:44:1', 'test_dag.r:51:1',
'test_dag.r:64:1', 'test_node.r:548:1', 'test_node_rsurv.r:99:3',
'test_plot.DAG.r:11:1', 'test_plot.DAG.r:15:1', 'test_plot.DAG.r:19:1',
'test_plot.DAG.r:23:1', 'test_plot.DAG.r:27:1', 'test_plot.DAG.r:31:1',
'test_plot.DAG.r:35:1', 'test_plot.DAG.r:40:1', 'test_plot.DAG.r:44:1',
'test_plot.DAG.r:52:1', 'test_plot.DAG.r:59:1', 'test_plot.DAG.r:64:1',
'test_plot.DAG.r:69:1', 'test_plot.DAG.r:100:1', 'test_plot.DAG.r:104:1',
'test_plot.DAG.r:108:1', 'test_plot.simDT.r:24:1', 'test_plot.simDT.r:28:1',
'test_plot.simDT.r:32:1', 'test_plot.simDT.r:36:1', 'test_plot.simDT.r:40:1',
'test_plot.simDT.r:48:1', 'test_plot.simDT.r:56:1', 'test_simDT_S3.r:11:1',
'test_simDT_S3.r:15:1', 'test_simDT_S3.r:20:1', 'test_simDT_S3.r:25:1',
'test_sim_discrete_event.r:693:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_network.r:458:3'): mixing net() and mixed terms in formula syntax ──
Expected `round(mean(data$Y), 3)` to equal `-5.302`.
Differences:
`actual`: -5.3000
`expected`: -5.3020
── Failure ('test_node_lmer.r:15:3'): simple random effect ─────────────────────
Expected `round(mean(data$Y), 3)` to equal `-1.995`.
Differences:
`actual`: -1.9900
`expected`: -1.9950
── Failure ('test_node_lmer.r:46:3'): simple random effect in disrete-time simulation ──
Expected `round(mean(data$Y), 3)` to equal `-1.864`.
Differences:
`actual`: -1.852
`expected`: -1.864
── Failure ('test_node_lmer.r:79:3'): simple random effect + categorical fixed effect ──
Expected `round(mean(data$Y), 3)` to equal `-0.519`.
Differences:
`actual`: -0.5130
`expected`: -0.5190
── Failure ('test_node_lmer.r:172:3'): simple random effect + cubic terms ──────
Expected `round(mean(data$Y), 3)` to equal `-1.802`.
Differences:
`actual`: -1.7970
`expected`: -1.8020
── Failure ('test_node_lmer.r:202:3'): simple random effect + ONLY cubic terms ──
Expected `round(mean(data$Y), 3)` to equal `-1.856`.
Differences:
`actual`: -1.8510
`expected`: -1.8560
── Failure ('test_node_lmer.r:233:3'): multiple random effects ─────────────────
Expected `round(mean(data$Y), 3)` to equal `-2.178`.
Differences:
`actual`: -2.1790
`expected`: -2.1780
── Failure ('test_node_lmer.r:266:3'): with random effects and random slopes ───
Expected `round(mean(data$Y), 3)` to equal `-1.979`.
Differences:
`actual`: -1.9740
`expected`: -1.9790
── Failure ('test_node_lmer.r:294:3'): mixed model term with + in it ───────────
Expected `round(mean(data$Y), 3)` to equal `-2.361`.
Differences:
`actual`: -2.3650
`expected`: -2.3610
── Failure ('test_node_lmer.r:308:3'): works with function input ───────────────
Expected `round(mean(data$Y), 3)` to equal `-2.361`.
Differences:
`actual`: -2.3650
`expected`: -2.3610
── Failure ('test_node_lmer.r:363:3'): random effects with net() syntax ────────
Expected `round(mean(data$Y), 3)` to equal `-5.3`.
Differences:
`actual`: -5.2990
`expected`: -5.3000
── Failure ('test_node_lmer.r:387:3'): simple random effect with non-default link ──
Expected `round(mean(data$Y), 3)` to equal `-1.995`.
Differences:
`actual`: -1.9900
`expected`: -1.9950
[ FAIL 12 | WARN 14 | SKIP 56 | PASS 1026 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc