# Microstructure Information from Diffusion Imaging

## Documentation for package ‘midi’ version 0.2.0

- DESCRIPTION file.
- Package NEWS.

## Help Pages

autoplot.bundle | Plots a cross section of a cylinder bundle using *ggplot2*
bvalue | B-Value Calculation
CallaghanCompartment | Callaghan's model for restricted diffusion in a cylinder
CylinderBundleCompartment | Cylinder bundle compartment class
CylinderCompartment | Cylinder compartment class
FreeCompartment | Free compartment class
GammaDistribution | Gamma distribution class
NeumanCompartment | Neuman's model for restricted diffusion in a cylinder
plot.bundle | Plots a cross section of a cylinder bundle
plot3d | Plots a 3D representation of a cylinder bundle using *plotly*
rcylinders | Sample cylinder compartments
run_app | Runs the MIDI Shiny web application
simulate_bundle | Generates a cross section of a cylinder bundle
SodermanCompartment | Soderman's model for restricted diffusion in a cylinder
SphereCompartment | Sphere compartment class
StaniszCompartment | Stanisz's model for restricted diffusion in a cylinder
VanGelderenCompartment | Van Gelderen's model for restricted diffusion in a cylinder
WatsonDistribution | Watson distribution class