General Effect Modelling

Documentation for package ‘gemR’ version 1.2.1

Help Pages

coef.GEMglmnet	Elastic-net modeling of GEM objects.
confints	Confidence Intervals of Effect Differences
confints.default	Confidence Intervals of Effect Differences
confints.GEM	Confidence Intervals of Effect Differences
corrplot	Plot function and extraction method for GEM-based PLS
Diabetes	Diabetes data
elastic	Elastic-net modeling of GEM objects.
elastic.GEM	Elastic-net modeling of GEM objects.
explvar	Plot function and extraction method for GEM-based PLS
explvar.GEMpls	Plot function and extraction method for GEM-based PLS
GEM	General Effect Modelling
gemR	General Effect Modelling
knock.in	Knock-in and knock-out of effect(s)
knock.out	Knock-in and knock-out of effect(s)
Lactobacillus	Lactobacillus data
loadingplot	Plot function and extraction method for GEM-based PLS
loadings	Plot function and extraction method for GEM-based PLS
MS	Multiple Sclerosis data
mvrValstats	Plot function and extraction method for GEM-based PLS
neuralnet	Neural Network by Multilayer Perceptron
pca	Principal Component Analysis
plot.confints	Confidence Intervals of Effect Differences
plot.GEM	General Effect Modelling
plot.GEM.pls	Plot function and extraction method for GEM-based PLS
plot.GEMpls	Plot function and extraction method for GEM-based PLS
pls	Partial Least Squares modelling of GEM objects.
pls.GEM	Partial Least Squares modelling of GEM objects.
print.GEM	General Effect Modelling
print.GEMpls	Plot function and extraction method for GEM-based PLS
print.summary.GEM	General Effect Modelling
R2	Plot function and extraction method for GEM-based PLS
sca	Simultaenous Component Analysis
scoreplot	Plot function and extraction method for GEM-based PLS
scores	Plot function and extraction method for GEM-based PLS
summary.GEM	General Effect Modelling
summary.GEMpls	Plot function and extraction method for GEM-based PLS
tableGEM	General Effect Modelling