Geometric Morphometric Tools to Align, Scale, and Compare "Shape" of Menstrual Cycle Hormones

Documentation for package ‘moRphomenses’ version 1.0.3

mm_ArrayData	Array Data
mm_BuildModel	Build, implement, visualize multivariate linear model.
mm_CalcShapespace	Define Shapespace of aligned dataset.
mm_CheckImputation	Check Imputation
mm_ColorLeaves	Color leves of a dendrogram
mm_CompModel	Compare Model Metrics
mm_CompModel_Full	Compare Complex Model Metrics
mm_coords_to_shape	Visualize shape of target coordinates
mm_data	Sample hormone dataset
mm_Diagnostics	Run a suite of diagnostic analyses.
mm_ellipse	Add confidence ellipses to an active scatterplot.
mm_Explorer	Launch mm_Explorer
mm_FillMissing	Impute Missing Data
mm_FlattenArray	Flatten Array
mm_get_interval	Create equallly spaced intervals.
mm_grps_PlotArray	Plot Arrays of groups
mm_grp_dists	Distance from Centroid
mm_mute_cols	Take a color and modify it
mm_Phenotype	Generate Phenotypes
mm_PlotArray	Plot Array Plot individuals and optionally mean form
mm_pretty_pca	Plot Calendar Days
mm_ScreePlot	Scree Plot
mm_SilPlot	Silhouette Width Plot
mm_transf_geom	Geometric Scaling
mm_transf_log	natural log transform
mm_transf_log10	Common log transform
mm_transf_minmax	Min-Max Scaling
mm_transf_zscore	Z scores
mm_VizModel	Visualize Multivariate LM
mm_VizShapespace	Visualize PC axes
moRphomenses	Geometric Morphometric Analysis of Hormone Cycle Phenotypes
moRphomenses_PACKAGE	Geometric Morphometric Analysis of Hormone Cycle Phenotypes
print_summary	Print basic summary