Generalised Joint Regression Modelling

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Documentation for package ‘GJRM’ version 0.2-6.8

• DESCRIPTION file.

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A B C D E F G H I J K L M N O P R S T V W X

GJRM-package

Generalised Joint Regression Modelling

-- A --

aCov	Adjustment for the covariance matrix from a fitted gjrm model
adjCov	Adjustment for the covariance matrix from a fitted gjrm model
adjCovSD	Adjustment for the covariance matrix from a gjrm model fitted to complex survey data.
approx.CLM	Internal Function
ass.dp	Internal Function
ATE	Average Treatment Effect of a binary or continuous treatment variable

-- B --

BCDF	Internal Function
bcont	Internal Function
bcont23	Internal Function
bcont3	Internal Function
bcont32	Internal Function
bcontROB	Internal Function
bcontSurvGBINROY	Internal Function
bcontSurvGBINss	Internal Function
bcontSurvGunivI	Internal Function
bcontSurvGunivInform	Internal Function
bcontSurvGunivI_ExcessHazard	Internal Function
bcontSurvGunivL	Internal Function
bcontSurvGunivL_ExcessHazard	Internal Function
bcontSurvGunivMIXED	Internal Function
bcontSurvGunivMIXED_ExcessHazard	Internal Function
bcontSurvGunivMIXED_ExcessHazard_LeftTruncation	Internal Function
bcontSurvGunivMIXED_LeftTruncation	Internal Function
bcontSurvGuniv_ExcessHazard	Internal Function
bcontSurvG_extended	Internal Function
bCopulaCLMgHsCont	Internal Function
bCopulaCLMgHsOrd	Internal Function
bcorrec	Internal Function
bcorrecDiscr	Internal Function
bcorrecFuncs	Internal Function
bdiscrcont	Internal Function
bdiscrcont12	Internal Function
bdiscrcont13	Internal Function
bdiscrcont23	Internal Function
bdiscrdiscr11	Internal Function
bdiscrdiscr12	Internal Function
BiCDF	Internal Function
bprobgHs	Internal Function
bprobgHsBinROY	Internal Function
bprobgHsCont	Internal Function
bprobgHsCont2ROY	Internal Function
bprobgHsCont3	Internal Function
bprobgHsCont3binTW	Internal Function
bprobgHsCont3binTWSS	Internal Function
bprobgHsCont3ROY	Internal Function
bprobgHsCont3SS	Internal Function
bprobgHsContSS	Internal Function
bprobgHsContUniv	Internal Function
bprobgHsContUniv3	Internal Function
bprobgHsContUnivBIN	Internal Function
bprobgHsDiscr1	Internal Function
bprobgHsDiscr1ROY	Internal Function
bprobgHsDiscr1SS	Internal Function
bprobgHsDiscr2	Internal Function
bprobgHsDiscr2ROY	Internal Function
bprobgHsDiscr2SS	Internal Function
bprobgHsPO	Internal Function
bprobgHsPO0	Internal Function
bprobgHsSS	Internal Function
bprobgHstwoParC	Internal Function

-- C --

clarke.test	Clarke test
cond.mv	Conditional Mean/Variance from a Copula Model
conv.check	Some convergence diagnostics
Cop1Cop2	Internal Function
copgHs	Internal Function
copgHs2	Internal Function
copgHs3	Internal Function
copgHsAT	Internal Function
copgHsCond	Internal Function
copgHsCont	Internal Function
copula.prob	Copula probabilities (joint and conditional) from a fitted simultaneous model
CopulaCLM	Internal fitting function
copulaReg.fit.post	Internal Function
copulaSampleSel	Internal fitting function
copulaSampleSel.fit.post	Internal Function
cov.c	Internal Function
cv.inform	Cross validation for informative censoring univariate survival models

-- D --

distrExIntegrate	Internal Function
distrHs	Internal Function
distrHsAT	Internal Function
distrHsAT1	Internal Function
distrHsATDiscr	Internal Function
distrHsATDiscr2	Internal Function
distrHsDiscr	Internal Function
dof.tr	Internal Function
Dpens	Differentiable penalties
Dpens2	Internal Function

-- E --

edf.loop	Internal Function
enu.tr	Internal Function
esp.tr	Internal Function
eta.tr	Internal Function

-- F --

form.check	Internal Function
form.eq12	Internal Function

-- G --

g.tri	Internal Function
g.triESS	Internal Function
g.triSS	Internal Function
gamls.upsv	Internal Function
gamlss	Generalised Additive Models for Location, Scale and Shape and Beyond
gamlss.fit.post	Internal Function
gamlssObject	Fitted gamlssObject object
ggm.Deriv	Internal Function
ggm.DerivOPT1	Internal Function
ggm.DerivOPT2	Internal Function
ggmtrust	ggmtrust for penalised network
ggmtrust.path	Internal Function
gjrm	Generalised Joint Regression Models with Binary/Continuous/Discrete/Survival Margins
gjrmObject	Fitted gjrm object
gt.bpm	Gradient test

-- H --

H.tri	Internal Function
H.triESS	Internal Function
H.triSS	Internal Function
haz.surv	Post-estimation calculation of hazard, cumulative hazard and survival functions

-- I --

inform.setup	Internal Function
int.rescheck	Diagnostic plots for discrete/continuous response margins
intB	Internal Function

-- J --

jc.probs1	Copula probabilities (joint and conditional) from a fitted simultaneous model
jc.probs2	Copula probabilities (joint and conditional) from a fitted simultaneous model
jc.probs3	Copula probabilities (joint and conditional) from a fitted simultaneous model
jc.probs4	Copula probabilities (joint and conditional) from a fitted simultaneous model
jc.probs5	Copula probabilities (joint and conditional) from a fitted simultaneous model
jc.probs6	Copula probabilities (joint and conditional) from a fitted simultaneous model
jc.probs7	Copula probabilities (joint and conditional) from a fitted simultaneous model
jc.probs8	Copula probabilities (joint and conditional) from a fitted simultaneous model

-- K --

k.tau

Kendall's tau a fitted joint model

-- L --

llpsi	Internal Function
LM.bpm	Lagrange Multiplier Test (Score Test)
lmc	Linear Model Fitting with Constraints
logLik.ggmtrust	Extract the log likelihood for a fitted copula model
logLik.lmc	Extract the log likelihood for a fitted copula model
logLik.SemiParBIV	Extract the log likelihood for a fitted copula model

-- M --

marg.mv	Marginal Mean/Variance
mb	Nonparametric (worst-case and IV) Manski's bounds
mice.impute.copulaSS	Internal Function
mm	Internal Function
mmf	Internal Function

-- N --

numch	Internal Function
numgh	Internal Function

-- O --

OR	Causal odds ratio of a binary/continuous treatment variable
overall.sv	Internal Function
overall.svG	Internal Function

-- P --

PDef	Internal Function
PE	Partial effect from a binary bivariate model
pen	Internal Function
penCor	Internal Function
plot.SemiParBIV	Plotting function
polys.map	Geographic map with regions defined as polygons
polys.setup	Set up geographic polygons
PosDefCor	Internal Function
postVb	Internal Function
pp	Internal Function
pream.wm	Internal Function
pred.gp	Function to predict quantiles from GP and DGP distributions
pred.var	Internal Function
predict.CopulaCLM	Prediction function
predict.SemiParBIV	Prediction function
prev	Estimated overall prevalence from a sample selection model
print.ATE	Print an ATE object
print.cond.mv	Print a cond.mv object
print.copulaSampleSel	Print a copulaSampleSel object
print.gamlss	Print a gamlss object
print.gjrm	Print a gjrm object
print.marg.mv	Print a marg.mv object
print.mb	Print an mb object
print.OR	Print an OR object
print.PE	Print an PE object
print.prev	Print an prev object
print.RR	Print an RR object
print.SATE	Print an SATE object
print.SemiParBIV	Print a SemiParBIV object
print.SemiParROY	Print a SemiParROY object
print.SemiParTRIV	Print a SemiParTRIV object
print.summary.copulaSampleSel	copulaSampleSel summary
print.summary.gamlss	gamlss summary
print.summary.gjrm	gjrm summary
print.summary.SemiParBIV	SemiParBIV summary
print.summary.SemiParROY	SemiParROY summary
print.summary.SemiParTRIV	SemiParTRIV summary
probm	Internal Function
probmS	Internal Function
pscr	Internal Function
pscr0	Internal Function
pTweed	Internal Function

-- R --

r.resp	Internal Function
Reg2Copost	Internal Function
regH	Internal Function
res.check	Diagnostic plots for discrete/continuous response margins
resp.check	Diagnostic plot for a variable
resp.CLM	Internal Function
rIC	Internal Function
rMVN	Multivariate Normal Variates
rob.const	Bootstrap procedure to help select the robust constant in a GAMLSS
rob.int	Tool for tuning bounds of integral in robust models
RR	Causal risk ratio of a binary/continuous treatment variable

-- S --

S.m	Internal Function
SATE	Survival Average Treatment Effects of a binary treatment variable
SemiParBIV	Internal fitting function
SemiParBIV.fit	Internal Function
SemiParBIV.fit.post	Internal Function
SemiParROY	Internal fitting function
SemiParROY.fit.post	Internal Function
SemiParTRIV	Internal fitting function
SemiParTRIV.fit.post	Internal Function
sim.resp	Internal Function
SS	Internal Function
startsn	Internal Function
summary.copulaSampleSel	copulaSampleSel summary
summary.gamlss	gamlss summary
summary.gjrm	gjrm summary
summary.SemiParBIV	SemiParBIV summary
summary.SemiParROY	SemiParROY summary
summary.SemiParTRIV	SemiParTRIV summary
survExcInd	Internal Function
susu	Internal Function
susutsn	Internal Function

-- T --

teta.tr	Internal Function
theta2tau	Internal Function
TRIapprox	Internal Function
triprobgHs	Internal Function
triprobgHsESS	Internal Function
triprobgHsSS	Internal Function

-- V --

vis.gam2	Internal Function
vuong.test	Vuong test

-- W --

working.comp

Internal Function

-- X --

Xdpred

Internal Function