Interface to the 'g:Profiler' Toolset

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Documentation for package ‘gprofiler2’ version 0.2.4

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

gconvert	Gene ID conversion.
get_base_url	Get the current base URL.
get_tls_version	Get the TLS version for SSL
get_user_agent	Get current user agent string.
get_version_info	Get version info of g:Profiler data sources
gorth	Orthology search.
gost	Gene list functional enrichment.
gostplot	Manhattan plot of functional enrichment results.
gprofiler_request	Perform a g:Profiler API request
gsnpense	Convert SNP rs identifiers to genes.
mapViridis	Map vector of numeric values to Viridis color scale.
publish_gostplot	Create and save an annotated Manhattan plot of enrichment results.
publish_gosttable	Create and save a table with the functional enrichment analysis results.
random_query	Generate a random gene list for testing.
set_base_url	Set the base URL.
set_tls_version	Set the TLS version to use for SSL
set_user_agent	Set custom user agent string.
upload_GMT_file	Upload custom annotations for functional enrichment analysis in g:GOSt.