| AIC.cauphyfit | Generic Methods for S3 class 'cauphyfit'. |
| AIC.cauphylm | Generic Methods for S3 class 'cauphylm'. |
| AIC.logLik.cauphyfit | Generic Methods for S3 class 'cauphyfit'. |
| AIC.logLik.cauphylm | Generic Methods for S3 class 'cauphylm'. |
| ancestral | Posterior density of a node |
| ancestral.cauphyfit | Posterior density of a node |
| ancestral.cauphylm | Posterior density of a node |
| cauphylm | Phylogenetic Regression using a Cauchy Process |
| coef.cauphyfit | Generic Methods for S3 class 'cauphyfit'. |
| coef.cauphylm | Generic Methods for S3 class 'cauphylm'. |
| compute_vcov | Compute Approximated Variance Covariance Matrix |
| confint.cauphyfit | Generic Methods for S3 class 'cauphyfit'. |
| confint.cauphylm | Generic Methods for S3 class 'cauphylm'. |
| fitCauchy | Model fitting for a Cauchy Process |
| hdi.ancestralCauchy | Highest (Posterior) Density Interval |
| increment | Posterior density of an increment |
| increment.cauphyfit | Posterior density of an increment |
| increment.cauphylm | Posterior density of an increment |
| lizards | Greater Antillean Anolis lizard dataset |
| logDensityTipsCauchy | Log Density of a Cauchy Process |
| logLik.cauphyfit | Generic Methods for S3 class 'cauphyfit'. |
| logLik.cauphylm | Generic Methods for S3 class 'cauphylm'. |
| plot.ancestralCauchy | Plot for class 'ancestralCauchy' |
| plot.profile.cauphyfit | Plot for class 'profile.cauphyfit' |
| plot_asr | Plot Ancestral States Reconstructions |
| posteriorDensityAncestral | Posterior density of a node |
| posteriorDensityIncrement | Posterior density of an increment |
| predict.cauphylm | Generic Methods for S3 class 'cauphylm'. |
| print.cauphyfit | Generic Methods for S3 class 'cauphyfit'. |
| print.cauphylm | Generic Methods for S3 class 'cauphylm'. |
| profile.cauphyfit | Method for Profiling 'cauphyfit' Objects |
| rTraitCauchy | Cauchy Trait Simulation |
| vcov.cauphyfit | Generic Methods for S3 class 'cauphyfit'. |
| vcov.cauphylm | Generic Methods for S3 class 'cauphylm'. |