| benchmarkData | Data for performing a benchmark |
| benchmarkResults | Results from running a performance benchmark on a personal computer including the time for parameter transformation |
| benchmarkResultsNoTransform | Results from running a performance benchmark on a personal computer excluding the time for parameter transformation |
| BenchmarkRvsCpp | A log-likelihood calculation time comparison for different numbers of traits and option-sets |
| MiniBenchmarkRvsCpp | Evaluate the likelihood calculation times for example trees and data |
| PCListInt | Converts the logical matrix pc into a list of vectors denoting the (0-based) TRUE-indices in each column |
| PCMBaseCppIsADevRelease | Check if the PCMBaseCpp version correpsonds to a dev release |
| PCMInfoCpp | A S3 generic for creating C++ backend objects given a model, data and a tree. |
| PCMParamGetFullVector | Get a vector with all model parameters unrolled |
| PCMTreePreorderCpp | Fast preorder of the edges in a tree |