Generalized Dissimilarity Modeling

Documentation for package ‘gdm’ version 1.6.0-7

gdm-package	Overview of the functions in the gdm package
calculate.gdm.deviance	Calculate GDM Deviance for Observed & Predicted Dissimilarities
formatsitepair	Combines Biological and Environmental Data to Produce a GDM-formatted Site-Pair Table
gdm	Fit a Generalized Dissimilarity Model to Tabular Site-Pair Data
gdm.crossvalidation	Cross-Validation Assessment of a Fitted GDM
gdm.partition.deviance	Perform Deviance Partitioning of a Fitted GDM
gdm.transform	Transform Environmental Data Using a Fitted Generalized Dissimilarity Model
gdm.varImp	Assess Predictor Importance and Quantify Model Significance in a Fitted Generalized Dissimilarity Model.
gdmDissim	An example biological dissimilarity matrix
isplineExtract	Extract I-spline Values From a Fitted Generalized Dissimilarity Model.
plot.gdm	Plot Model Fit and I-splines from a Fitted Generalized Dissimilarity Model.
plotUncertainty	Plot I-splines With Error Bands Using Bootstrapping.
predict.gdm	Predict Biological Dissimilarities Between Sites or Times Using a Fitted Generalized Dissimilarity Model
southwest	Species and Environmental Data from Southwestern Australia.
subsample.sitepair	Remove Sites at Random from a Site-Pair Table
summary.gdm	Summarize a Fitted Generalized Dissimilarity Model