Last updated on 2026-03-06 13:49:30 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.1 | 615.78 | 381.47 | 997.25 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0.1 | 505.86 | 323.97 | 829.83 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.1 | 660.00 | 614.02 | 1274.02 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.1 | 1260.00 | 574.22 | 1834.22 | ERROR | |
| r-devel-macos-arm64 | 1.0.1 | 137.00 | 20.00 | 157.00 | OK | |
| r-devel-windows-x86_64 | 1.0.1 | 633.00 | 553.00 | 1186.00 | OK | |
| r-patched-linux-x86_64 | 1.0.1 | 704.87 | 544.22 | 1249.09 | OK | |
| r-release-linux-x86_64 | 1.0.1 | 707.45 | 546.61 | 1254.06 | OK | |
| r-release-macos-arm64 | 1.0.1 | OK | ||||
| r-release-macos-x86_64 | 1.0.1 | 381.00 | 217.00 | 598.00 | OK | |
| r-release-windows-x86_64 | 1.0.1 | 635.00 | 550.00 | 1185.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.1 | NOTE | ||||
| r-oldrel-macos-x86_64 | 1.0.1 | 319.00 | -37.00 | 282.00 | NOTE | |
| r-oldrel-windows-x86_64 | 1.0.1 | 746.00 | 726.00 | 1472.00 | NOTE |
Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Differential-Synth.Rmd’ using rmarkdown
Quitting from Differential-Synth.Rmd:28-42 [setup]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'DESeq2'
---
Backtrace:
▆
1. └─base::library(DESeq2)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Differential-Synth.Rmd' failed with diagnostics:
there is no package called 'DESeq2'
--- failed re-building ‘Differential-Synth.Rmd’
--- re-building ‘Dropout.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘Dropout.Rmd’
--- re-building ‘Getting-Started.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘Getting-Started.Rmd’
--- re-building ‘NSS.Rmd’ using rmarkdown
Quitting from NSS.Rmd:31-46 [setup]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'DESeq2'
---
Backtrace:
▆
1. └─base::library(DESeq2)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'NSS.Rmd' failed with diagnostics:
there is no package called 'DESeq2'
--- failed re-building ‘NSS.Rmd’
--- re-building ‘Troubleshooting.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘Troubleshooting.Rmd’
--- re-building ‘bakR-Fn.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘bakR-Fn.Rmd’
--- re-building ‘bakR-Quickstart.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘bakR-Quickstart.Rmd’
SUMMARY: processing the following files failed:
‘Differential-Synth.Rmd’ ‘NSS.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.0.1
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘RcppParallel’ ‘rstantools’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘Differential-Synth.Rmd’ using rmarkdown
Quitting from Differential-Synth.Rmd:28-42 [setup]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'DESeq2'
---
Backtrace:
▆
1. └─base::library(DESeq2)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Differential-Synth.Rmd' failed with diagnostics:
there is no package called 'DESeq2'
--- failed re-building ‘Differential-Synth.Rmd’
--- re-building ‘Dropout.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘Dropout.Rmd’
--- re-building ‘Getting-Started.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘Getting-Started.Rmd’
--- re-building ‘NSS.Rmd’ using rmarkdown
Quitting from NSS.Rmd:31-46 [setup]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'DESeq2'
---
Backtrace:
▆
1. └─base::library(DESeq2)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'NSS.Rmd' failed with diagnostics:
there is no package called 'DESeq2'
--- failed re-building ‘NSS.Rmd’
--- re-building ‘Troubleshooting.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘Troubleshooting.Rmd’
--- re-building ‘bakR-Fn.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘bakR-Fn.Rmd’
--- re-building ‘bakR-Quickstart.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘bakR-Quickstart.Rmd’
SUMMARY: processing the following files failed:
‘Differential-Synth.Rmd’ ‘NSS.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.0.1
Check: installed package size
Result: NOTE
installed size is 103.3Mb
sub-directories of 1Mb or more:
libs 101.5Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.0.1
Check: for GNU extensions in Makefiles
Result: NOTE
GNU make is a SystemRequirements.
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64