Last updated on 2026-04-24 13:17:54 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.8.2 | 21.32 | 357.58 | 378.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.8.2 | 13.67 | 245.74 | 259.41 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.8.2 | 43.00 | 651.92 | 694.92 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.8.2 | 38.00 | 592.74 | 630.74 | OK | |
| r-patched-linux-x86_64 | 1.8.2 | 17.41 | 331.02 | 348.43 | OK | |
| r-release-linux-x86_64 | 1.8.2 | 17.81 | 317.06 | 334.87 | OK | |
| r-release-macos-arm64 | 1.8.2 | 5.00 | 100.00 | 105.00 | OK | |
| r-release-macos-x86_64 | 1.8.2 | 15.00 | 308.00 | 323.00 | ERROR | |
| r-release-windows-x86_64 | 1.8.2 | 27.00 | 447.00 | 474.00 | OK | |
| r-oldrel-macos-arm64 | 1.8.2 | 5.00 | 100.00 | 105.00 | OK | |
| r-oldrel-macos-x86_64 | 1.8.2 | 15.00 | 514.00 | 529.00 | OK | |
| r-oldrel-windows-x86_64 | 1.8.2 | 31.00 | 424.00 | 455.00 | OK |
Version: 1.8.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [47s/84s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> Sys.setenv("R_TESTS" = "")
> library(testthat)
> library(campsis)
Loading required package: campsismod
Attaching package: 'campsismod'
The following object is masked from 'package:utils':
find
The following objects are masked from 'package:base':
Position, as.data.frame, replace, replicate, sort, toString, write
Attaching package: 'campsis'
The following object is masked from 'package:stats':
simulate
The following objects are masked from 'package:base':
months, sample
> test_check("campsis")
Saving _problems/testCompilationError-19.R
---:: stderr ::---------------------------------------------
------------------------------------------------------------
---:: stderr ::---------------------------------------------
------------------------------------------------------------
Saving _problems/testDefaultPlots-50.R
Saving _problems/testDefaultPlots-77.R
Saving _problems/testDefaultPlots-120.R
Saving _problems/testSimulateArguments-21.R
Saving _problems/testSimulateArguments-35.R
Saving _problems/testSimulateBioavailability-30.R
Saving _problems/testSimulateBioavailability-49.R
Saving _problems/testSimulateBioavailability-80.R
Saving _problems/testSimulateBolus-23.R
Saving _problems/testSimulateBolus-40.R
Saving _problems/testSimulateBolus-66.R
Saving _problems/testSimulateBolus-89.R
Saving _problems/testSimulateBolus-130.R
Saving _problems/testSimulateBolusInfusionSameCmt-29.R
Saving _problems/testSimulateDeclare-24.R
Saving _problems/testSimulateDoseAdaptation-24.R
Saving _problems/testSimulateDoseAdaptation-43.R
Saving _problems/testSimulateDoseAdaptation-68.R
Saving _problems/testSimulateDoseAdaptation-98.R
Saving _problems/testSimulateDosingInfo-24.R
Saving _problems/testSimulateInfusion-59.R
Saving _problems/testSimulateInfusion-96.R
Saving _problems/testSimulateInfusion-117.R
Saving _problems/testSimulateInit-21.R
Saving _problems/testSimulateInit-37.R
Saving _problems/testSimulateLagTime-23.R
Saving _problems/testSimulateLagTime-44.R
Saving _problems/testSimulateMinimalistModel-20.R
Saving _problems/testSimulateNoOmega-30.R
Saving _problems/testSimulateOutvars-23.R
Saving _problems/testSimulateOutvars-42.R
Saving _problems/testSimulateOutvars-57.R
Saving _problems/testSimulateOutvars-72.R
Saving _problems/testSimulateOutvars-89.R
Saving _problems/testSimulateOutvars-105.R
Saving _problems/testSimulateRUV-25.R
Saving _problems/testSimulateScenarios-44.R
Saving _problems/testSimulateScenarios-69.R
Saving _problems/testSimulateScenarios-101.R
Saving _problems/testSimulateTSLD-27.R
Saving _problems/testSimulateTable-23.R
Saving _problems/testSimulateTimeVaryingCovariates-24.R
Saving _problems/testSimulateTimeVaryingCovariates-57.R
Saving _problems/testSimulateWeirdCases-35.R
Saving _problems/testSimulateWeirdCases-97.R
Saving _problems/testSimulateWeirdCases-119.R
Saving _problems/testSimulateWeirdCases-136.R
[ FAIL 48 | WARN 0 | SKIP 28 | PASS 480 ]
══ Skipped tests (28) ══════════════════════════════════════════════════════════
• empty test (28): 'testSimulateEvents.R:8:1', 'testSimulateEvents.R:32:1',
'testSimulateEvents.R:55:1', 'testSimulateEvents.R:79:1',
'testSimulateEvents.R:112:1', 'testSimulateEventsLogic.R:8:1',
'testSimulateEventsLogic.R:41:1', 'testSimulateEventsLogic.R:79:1',
'testSimulateEventsLogic.R:125:1', 'testSimulateEventsLogic.R:148:1',
'testSimulateIOV.R:8:1', 'testSimulateIOV.R:47:1', 'testSimulateIOV.R:79:1',
'testSimulateIOV.R:129:1', 'testSimulateIOV.R:193:1',
'testSimulateIOV.R:241:1', 'testSimulateInfusion.R:8:1',
'testSimulateNocbLocf.R:8:1', 'testSimulateNocbLocf.R:49:1',
'testSimulateNocbLocf.R:89:1', 'testSimulateReplicates.R:10:1',
'testSimulateReplicates.R:41:1', 'testSimulateReplicates.R:65:1',
'testSimulateReplicates.R:118:1', 'testSimulateReplicates.R:154:1',
'testSimulateReplicates.R:189:1', 'testSimulateTTEModels.R:7:1',
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('testCompilationError.R:19:7'): Incorrect Campsis model does not compile and a clear error message is shown (rxode2/mrgsolve) ──
`simulate(model = model, dataset = ds, dest = destEngine)` threw an error with unexpected message.
Expected match: "The following parameter\\(s\\) are required for solving: BW"
Actual message: "ℹ In index: 1.\nℹ With name: 1.\nCaused by error in `map2()`:\nℹ In index: 1.\nCaused by error in `dyn.load()`:\n! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':\n dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE\n Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so\n Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib"
── Error ('testDefaultPlots.R:50:3'): Scatter plot works as expected (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testDefaultPlots.R:77:3'): Shaded and spaghetti plots work as expected (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testDefaultPlots.R:120:3'): Grouping by ARM and stratifying by WT should work (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateArguments.R:21:3'): Argument dest works well ────────────
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateArguments.R:35:3'): Auto seed value vs fix seed + default engine ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateBioavailability.R:30:3'): Simulate a bolus, 2 arms, F1 only in arm1, in dataset (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateBioavailability.R:49:3'): Simulate a simple bolus with bioavailability, dataset versus model (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateBioavailability.R:80:3'): Simulate several fixed F's at once (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateBolus.R:23:3'): Simulate a bolus (rxode2/mrgsolve) ──────
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateBolus.R:40:3'): Simulate a bolus, single-labelled arm (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateBolus.R:66:3'): Simulate a bolus, 2 arms (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateBolus.R:89:3'): Simulate a bolus, 2 labelled arms (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateBolus.R:130:3'): Simulate multiple doses, with and without the repeat option (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateBolusInfusionSameCmt.R:29:3'): Bolus and infusion in CMT 1 (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateDeclare.R:24:7'): Declare argument with mrgsolve ────────
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateDoseAdaptation.R:24:3'): Dose adaptations based on weight work well (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateDoseAdaptation.R:43:3'): Dose adaptations preserve specified infusion duration (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateDoseAdaptation.R:68:3'): Dose adaptations preserve specified infusion rate (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateDoseAdaptation.R:98:3'): Dose adaptations based on weight work well, check argument compartments works as expected (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateDosingInfo.R:24:3'): Dose adaptations can be checked in CAMPSIS output if dosing is TRUE (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateInfusion.R:59:3'): Simulate infusion using rate in dataset (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateInfusion.R:96:3'): Simulate infusion using rate and lag time in dataset (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateInfusion.R:117:3'): Simulate infusion using rate and lag time (parameter distribution) in dataset (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateInit.R:21:3'): Simulate initial conditions, observations starting at 0 (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateInit.R:37:3'): Simulate initial conditions, observations starting at 5 (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateLagTime.R:23:3'): Simulate a bolus with fixed lag time in dataset (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateLagTime.R:44:3'): Simulate a bolus with fixed lag time in model (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateMinimalistModel.R:20:3'): Simulate a minimalist model, no parameters/IIV/error model (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateNoOmega.R:30:3'): Simulate a 1-cpt model without OMEGA's/SIGMA's - Github issue #8 (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateOutvars.R:23:3'): NULL outvars (rxode2/mrgsolve) ────────
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateOutvars.R:42:3'): Not NULL outvars (rxode2/mrgsolve) ────
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateOutvars.R:57:3'): Not NULL outvars + DROP_OTHERS (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateOutvars.R:72:3'): Not NULL outvars from ERROR block + DROP_OTHERS (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateOutvars.R:89:3'): Covariates in outvars can be output well (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateOutvars.R:105:3'): ETAs in outvars can be output well (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateRUV.R:25:3'): Test generated RUV is correct (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateScenarios.R:44:3'): Simulate scenarios - make few changes on dataset (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateScenarios.R:69:3'): Simulate scenarios - make few changes on model (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateScenarios.R:101:3'): Export 'SCENARIO' column as soon as 1 scenario is specified. (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateTSLD.R:27:3'): Weibull model simulation works as expected (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateTable.R:23:3'): Simulate a bolus using the tabular dataset (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateTimeVaryingCovariates.R:24:3'): Body weight as a true time varying covariate (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateTimeVaryingCovariates.R:57:3'): Body weight as a true time varying covariate, 2 arms, individual body weights (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateWeirdCases.R:35:3'): Simulate a bolus with single observation at time 0 (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateWeirdCases.R:97:3'): Covariates must be trimmed by campsis to avoid issues (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateWeirdCases.R:119:3'): Arm label mapping must first verify the ARM column exists (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
── Error ('testSimulateWeirdCases.R:136:3'): Model advan1_trans1 must compile properly with mrgsolve v1.5.2 on Windows (rxode2/mrgsolve) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `map(.x, .f, ...)`: ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
[ FAIL 48 | WARN 0 | SKIP 28 | PASS 480 ]
Deleting unused snapshots:
'testDefaultPlots/scatterplot-colour-scenario-mrgsolve.svg',
'testDefaultPlots/scatterplot-colour-scenario-rxode2.svg',
'testDefaultPlots/scatterplot-no-colour-mrgsolve.svg',
'testDefaultPlots/scatterplot-no-colour-rxode2.svg',
'testDefaultPlots/shadedplot-colour-arm-strat-wt-mrgsolve.svg',
'testDefaultPlots/shadedplot-colour-arm-strat-wt-rxode2.svg',
'testDefaultPlots/shadedplot-colour-arm-wt-strat-wt-mrgsolve.svg',
'testDefaultPlots/shadedplot-colour-arm-wt-strat-wt-rxode2.svg',
'testDefaultPlots/shadedplot-colour-scenario-mrgsolve.svg',
'testDefaultPlots/shadedplot-colour-scenario-rxode2.svg',
'testDefaultPlots/spaghettiplot-colour-arm-strat-wt-mrgsolve.svg',
'testDefaultPlots/spaghettiplot-colour-arm-strat-wt-rxode2.svg',
'testDefaultPlots/spaghettiplot-colour-scenario-mrgsolve.svg',
'testDefaultPlots/spaghettiplot-colour-scenario-rxode2.svg',
'testSimulateReplicates/vpc-specified-outfun-mrgsolve-a.svg',
'testSimulateReplicates/vpc-specified-outfun-mrgsolve-b.svg',
'testSimulateReplicates/vpc-specified-outfun-mrgsolve-c.svg',
'testSimulateReplicates/vpc-specified-outfun-rxode2-a.svg',
'testSimulateReplicates/vpc-specified-outfun-rxode2-b.svg', and
'testSimulateReplicates/vpc-specified-outfun-rxode2-c.svg'
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.8.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘campsis.Rmd’ using rmarkdown
Quitting from campsis.Rmd:42-45 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/purrr_error_indexed>
Error in `map()`:
ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
---
Backtrace:
▆
1. ├─model %>% simulate(dataset, seed = 1)
2. ├─campsis::simulate(., dataset, seed = 1)
3. ├─campsis::simulate(., dataset, seed = 1)
4. │ └─campsis:::simulateDelegate(...)
5. │ └─seqReplicates %>% mapFun()
6. ├─campsis (local) mapFun(.)
7. │ └─purrr::map_dfr(.x = .x, .f = repFun, .id = "replicate")
8. │ └─purrr::map(.x, .f, ...)
9. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
10. │ ├─purrr:::with_indexed_errors(...)
11. │ │ └─base::withCallingHandlers(...)
12. │ ├─purrr:::call_with_cleanup(...)
13. │ └─campsis (local) .f(.x[[i]], ...)
14. │ ├─base::tryCatch(...)
15. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
16. │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
17. │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
18. │ └─campsis:::simulateScenarios(...)
19. │ └─scenarios@list %>% mapFun()
20. ├─campsis (local) mapFun(.)
21. │ └─purrr::imap_dfr(.x = .x, .f = scenarioFun)
22. │ └─purrr::map2(.x, vec_index(.x), .f, ...)
23. │ └─purrr:::map2_("list", .x, .y, .f, ..., .progress = .progress)
24. │ ├─purrr:::with_indexed_errors(...)
25. │ │ └─base::withCallingHandlers(...)
26. │ ├─purrr:::call_with_cleanup(...)
27. │ └─campsis (local) .f(.x[[i]], .y[[i]], ...)
28. │ └─campsis:::simulateDelegateCore(...)
29. │ ├─campsis::simulate(...)
30. │ └─campsis::simulate(...)
31. └─base::loadNamespace(x)
32. ├─base::namespaceImport(...)
33. └─base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
34. └─base::library.dynam(lib, package, package.lib)
35. └─base::dyn.load(file, DLLpath = DLLpath, ...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'campsis.Rmd' failed with diagnostics:
ℹ In index: 1.
ℹ With name: 1.
Caused by error in `map2()`:
ℹ In index: 1.
Caused by error in `dyn.load()`:
! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
--- failed re-building ‘campsis.Rmd’
--- re-building ‘v01_dataset.Rmd’ using rmarkdown
--- finished re-building ‘v01_dataset.Rmd’
--- re-building ‘v02_uncertainties.Rmd’ using rmarkdown
--- finished re-building ‘v02_uncertainties.Rmd’
--- re-building ‘v03_covariates.Rmd’ using rmarkdown
--- finished re-building ‘v03_covariates.Rmd’
--- re-building ‘v04_bioavailability.Rmd’ using rmarkdown
--- finished re-building ‘v04_bioavailability.Rmd’
--- re-building ‘v05_lag_time.Rmd’ using rmarkdown
--- finished re-building ‘v05_lag_time.Rmd’
--- re-building ‘v06_infusions.Rmd’ using rmarkdown
--- finished re-building ‘v06_infusions.Rmd’
--- re-building ‘v07_iov.Rmd’ using rmarkdown
--- finished re-building ‘v07_iov.Rmd’
--- re-building ‘v08_initial_conditions.Rmd’ using rmarkdown
--- finished re-building ‘v08_initial_conditions.Rmd’
--- re-building ‘v09_dose_adaptation.Rmd’ using rmarkdown
--- finished re-building ‘v09_dose_adaptation.Rmd’
--- re-building ‘v10_replicate_study.Rmd’ using rmarkdown
--- finished re-building ‘v10_replicate_study.Rmd’
--- re-building ‘v11_scenarios.Rmd’ using rmarkdown
--- finished re-building ‘v11_scenarios.Rmd’
--- re-building ‘v12_time_varying_covariates.Rmd’ using rmarkdown
--- finished re-building ‘v12_time_varying_covariates.Rmd’
--- re-building ‘v13_events.Rmd’ using rmarkdown
--- finished re-building ‘v13_events.Rmd’
--- re-building ‘v14_complex_pkpd_models.Rmd’ using rmarkdown
--- finished re-building ‘v14_complex_pkpd_models.Rmd’
--- re-building ‘v15_pkpd_model_library.Rmd’ using rmarkdown
--- finished re-building ‘v15_pkpd_model_library.Rmd’
--- re-building ‘v16_progress_bar.Rmd’ using rmarkdown
--- finished re-building ‘v16_progress_bar.Rmd’
--- re-building ‘v17_run_simulation_in_parallel.Rmd’ using rmarkdown
--- finished re-building ‘v17_run_simulation_in_parallel.Rmd’
SUMMARY: processing the following file failed:
‘campsis.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64