Last updated on 2026-06-08 13:50:31 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.6.4 | 25.52 | 178.24 | 203.76 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.6.4 | 17.40 | 152.19 | 169.59 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.6.4 | 39.00 | 286.70 | 325.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.6.4 | 46.00 | 314.64 | 360.64 | OK | |
| r-devel-windows-x86_64 | 0.1.6.4 | 28.00 | 223.00 | 251.00 | OK | |
| r-patched-linux-x86_64 | 0.1.6.4 | 23.33 | 178.57 | 201.90 | OK | |
| r-release-linux-x86_64 | 0.1.6.4 | 21.78 | 180.34 | 202.12 | OK | |
| r-release-macos-arm64 | 0.1.6.4 | 5.00 | 81.00 | 86.00 | OK | |
| r-release-macos-x86_64 | 0.1.6.4 | 16.00 | 311.00 | 327.00 | OK | |
| r-release-windows-x86_64 | 0.1.6.4 | 30.00 | 223.00 | 253.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.6.4 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.6.4 | 15.00 | 256.00 | 271.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.6.4 | 35.00 | 311.00 | 346.00 | OK |
Version: 0.1.6.4
Check: for unstated dependencies in examples
Result: WARN
Fatal error: cannot create 'R_TempDir'
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.6.4
Check: tests
Result: ERROR
Running ‘runTests.R’ [75s/87s]
Running the tests in ‘tests/runTests.R’ failed.
Complete output:
> library(RUnit)
> library(Rfast)
Loading required package: Rcpp
Loading required package: zigg
Loading required package: RcppParallel
Attaching package: 'RcppParallel'
The following object is masked from 'package:Rcpp':
LdFlags
Rfast: 2.1.5.2
___ __ __ __ __ __ __ __ __ __ _ _ __ __ __ __ __ __ __ __ __ __ __
| __ __ __ __ | | __ __ __ __ _/ / \ | __ __ __ __ / /__ __ _ _ __ __\
| | | | | | / _ \ | | / /
| | | | | | / / \ \ | | / /
| | | | | | / / \ \ | | / /
| |__ __ __ __| | | |__ __ __ __ / / \ \ | |__ __ __ __ _ / /__/\
| __ __ __ __| | __ __ __ __| / /__ _ __\ \ |_ __ __ __ _ | / ___ /
| \ | | / _ _ _ _ _ _ \ | | \/ / /
| |\ \ | | / / \ \ | | / /
| | \ \ | | / / \ \ | | / /
| | \ \ | | / / \ \ | | / /
| | \ \__ __ _ | | / / \ \ _ __ __ __ _| | / /
|_| \__ __ __\ |_| /_/ \_\ /_ __ __ __ ___| \/ team
> library(Matrix)
> library(cowplot)
> library(decorrelate)
> library(ggplot2)
> library(whitening)
Loading required package: corpcor
Attaching package: 'whitening'
The following object is masked from 'package:decorrelate':
whiten
> library(yacca)
yacca: Yet Another Canonical Correlation Analysis Package
Version 1.4-2 created on 2022-03-08.
copyright (c) 2008, Carter T. Butts, University of California-Irvine
For citation information, type citation("yacca").
Type help("yacca-package") to get started.
Attaching package: 'yacca'
The following object is masked from 'package:whitening':
cca
> library(decorrelate)
>
> # BiocGenerics:::testPackage
> testPackage <- function (pkgname = NULL, subdir = "unitTests", pattern = "^test_.*\\.R$",
+ path = getwd()) {
+ .failure_details <- function(result) {
+ res <- result[[1L]]
+ if (res$nFail > 0 || res$nErr > 0) {
+ Filter(function(x) length(x) > 0, lapply(res$sourceFileResults,
+ function(fileRes) {
+ names(Filter(function(x) x$kind != "success",
+ fileRes))
+ }))
+ }
+ else list()
+ }
+ if (is.null(pkgname)) {
+ root <- packageRoot(path)
+ if (is.null(root))
+ stop("could not infer package root directory")
+ pkgname0 <- packageInfo(root)$Package
+ if (is.null(pkgname)) {
+ pkgname <- pkgname0
+ }
+ else if (!identical(pkgname, pkgname0)) {
+ stop("'pkgname' and inferred DESCRIPTION 'Package' differ")
+ }
+ }
+ else {
+ root <- system.file(package = pkgname)
+ }
+ library(pkgname, character.only = TRUE, quietly = TRUE)
+ dir <- file.path(root, subdir)
+ if (!file.exists(dir)) {
+ dir <- file.path(root, "inst", subdir)
+ }
+ if (!file.exists(dir)) {
+ stop("unable to find unit tests, no subdir ", sQuote(subdir))
+ }
+ library("RUnit", quietly = TRUE)
+ RUnit_opts <- getOption("RUnit", list())
+ RUnit_opts$verbose <- 0L
+ RUnit_opts$silent <- TRUE
+ RUnit_opts$verbose_fail_msg <- TRUE
+ oopt <- options(RUnit = RUnit_opts)
+ on.exit(options(oopt))
+ suite <- RUnit::defineTestSuite(name = paste(pkgname, "RUnit Tests"),
+ dirs = dir, testFileRegexp = pattern, rngKind = "default",
+ rngNormalKind = "default")
+ result <- RUnit::runTestSuite(suite)
+ cat("\n\n")
+ RUnit::printTextProtocol(result, showDetails = FALSE)
+ if (length(details <- .failure_details(result)) > 0) {
+ cat("\nTest files with failing tests\n")
+ for (i in seq_along(details)) {
+ cat("\n ", basename(names(details)[[i]]), "\n")
+ for (j in seq_along(details[[i]])) {
+ cat(" ", details[[i]][[j]], "\n")
+ }
+ }
+ cat("\n\n")
+ stop("unit tests failed for package ", pkgname)
+ }
+ result
+ }
>
>
> testPackage("decorrelate")
Timing stopped at: 0.012 0 0.011
Error in loadNamespace(x) : there is no package called 'CCA'
RUNIT TEST PROTOCOL -- Sun Jun 7 14:29:10 2026
***********************************************
Number of test functions: 24
Number of errors: 1
Number of failures: 0
1 Test Suite :
decorrelate RUnit Tests - 24 test functions, 1 error, 0 failures
ERROR in test_cca: Error in loadNamespace(x) : there is no package called 'CCA'
Test files with failing tests
test_cca.R
test_cca
Error in testPackage("decorrelate") :
unit tests failed for package decorrelate
In addition: Warning message:
In chisq.test(x, y, correct = FALSE) :
Chi-squared approximation may be incorrect
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc