Last updated on 2025-11-07 12:50:03 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.93 | 258.73 | 271.66 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.31 | 197.01 | 207.32 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 260.60 | 275.78 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 13.00 | 208.00 | 221.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 14.00 | 206.00 | 220.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/155s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.763, system: 0.086, elapsed: 2.570 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.982, system: 0.410, elapsed: 18.783 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.023, elapsed: 0.443 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.134, system: 0.317, elapsed: 7.819 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.333 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.822, system: 0.875, elapsed: 30.975 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.041, elapsed: 2.885 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.599, system: 0.142, elapsed: 19.225 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.014, elapsed: 0.386 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.894, system: 0.175, elapsed: 7.026 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.335 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.002, system: 0.400, elapsed: 30.978 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.630, system: 0.034, elapsed: 3.156 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.511, system: 0.070, elapsed: 18.024 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.896, system: 0.189, elapsed: 7.684 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.349 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.230, system: 0.234, elapsed: 1.648 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.282, system: 0.566, elapsed: 32.415 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.565, system: 0.033, elapsed: 2.778 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.542, system: 0.067, elapsed: 17.952 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.351 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.891, system: 0.185, elapsed: 7.392 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.312 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.843, system: 0.494, elapsed: 21.772 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.895, system: 0.830, elapsed: 51.893 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.043, system: 0.128, elapsed: 3.919 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.972, system: 0.373, elapsed: 19.302 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.016, elapsed: 0.422 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.884, system: 0.221, elapsed: 7.277 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.011, elapsed: 0.314 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.849, system: 0.783, elapsed: 32.349 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.038, elapsed: 2.480 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.770, system: 0.084, elapsed: 18.539 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.352 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.940, system: 0.177, elapsed: 7.684 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.008, elapsed: 0.389 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.239, system: 0.358, elapsed: 30.413 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.676, system: 0.033, elapsed: 3.643 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.541, system: 0.080, elapsed: 16.532 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.011, elapsed: 0.354 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.178, elapsed: 6.023 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.011, elapsed: 0.312 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.115, system: 0.241, elapsed: 0.972 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.139, system: 0.589, elapsed: 29.168 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.594, system: 0.035, elapsed: 2.410 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.564, system: 0.100, elapsed: 15.194 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.013, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.809, system: 0.177, elapsed: 6.433 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.003, elapsed: 0.302 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.562, system: 0.463, elapsed: 20.323 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.581, system: 0.819, elapsed: 46.123 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64