Last updated on 2025-09-14 12:49:35 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.70 | 260.40 | 274.10 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.16 | 210.32 | 221.48 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 336.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.39 | 239.08 | 253.47 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 227.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 187.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 197.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/145s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.047, elapsed: 2.672 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.982, system: 0.076, elapsed: 14.520 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.297 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.740, system: 0.189, elapsed: 7.000 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.450 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.123, system: 0.348, elapsed: 25.867 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.424, system: 0.030, elapsed: 3.780 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.984, system: 0.095, elapsed: 15.114 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.391 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.796, system: 0.170, elapsed: 6.664 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.310 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.101, system: 0.328, elapsed: 27.495 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.556, system: 0.037, elapsed: 2.588 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.993, system: 0.069, elapsed: 15.710 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.638, system: 0.175, elapsed: 6.024 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.395 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.157, system: 0.203, elapsed: 1.368 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.322, system: 0.518, elapsed: 27.445 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.513, system: 0.037, elapsed: 2.888 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.005, system: 0.084, elapsed: 14.354 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.318 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.760, system: 0.188, elapsed: 6.956 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.512 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.274, system: 0.464, elapsed: 28.406 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.547, system: 0.817, elapsed: 54.773 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/127s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.546, system: 0.045, elapsed: 2.612 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.962, system: 0.094, elapsed: 14.274 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.015, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.652, system: 0.196, elapsed: 6.285 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.226 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.054, system: 0.374, elapsed: 24.521 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.040, elapsed: 2.392 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.926, system: 0.075, elapsed: 11.892 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.266 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.666, system: 0.172, elapsed: 5.458 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.004, elapsed: 0.298 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.044, system: 0.332, elapsed: 21.149 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.547, system: 0.033, elapsed: 2.583 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.922, system: 0.083, elapsed: 13.310 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.010, elapsed: 0.499 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.497, system: 0.154, elapsed: 8.073 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.012, elapsed: 0.314 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.064, system: 0.240, elapsed: 1.055 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.999, system: 0.562, elapsed: 27.047 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.456, system: 0.030, elapsed: 2.543 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.928, system: 0.068, elapsed: 14.968 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.370 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.547, system: 0.162, elapsed: 6.777 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.319 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.049, system: 0.450, elapsed: 19.585 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.990, system: 0.750, elapsed: 45.802 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64