Last updated on 2026-03-05 13:49:47 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.74 | 243.38 | 256.12 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.04 | 233.75 | 244.79 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 298.64 | 320.64 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 340.25 | 371.25 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 196.00 | 218.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.05 | 254.94 | 269.99 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.86 | 254.60 | 270.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 612.00 | 623.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 846.00 | 856.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 254.00 | 278.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/546s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.040, elapsed: 4.417 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.639, system: 0.112, elapsed: 27.051 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.020, elapsed: 1.193 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.301, system: 0.864, elapsed: 118.145 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.004, elapsed: 0.188 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.466, system: 1.061, elapsed: 152.307 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.032, elapsed: 1.655 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.855, system: 0.106, elapsed: 12.498 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.016, elapsed: 0.860 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.028, system: 0.860, elapsed: 129.011 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.003, elapsed: 0.206 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.433, system: 1.039, elapsed: 144.872 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.561, system: 0.032, elapsed: 2.468 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.786, system: 0.074, elapsed: 12.775 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.322, system: 0.015, elapsed: 0.989 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.856, system: 0.791, elapsed: 95.925 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.433 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.311, system: 0.306, elapsed: 2.222 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.707, system: 1.252, elapsed: 115.965 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.041, elapsed: 4.040 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.634, system: 0.074, elapsed: 15.849 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.016, elapsed: 0.895 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.448, system: 0.791, elapsed: 60.129 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.238 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.355, system: 0.650, elapsed: 39.515 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.122, system: 1.614, elapsed: 122.001 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/13m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.043, elapsed: 4.134 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.576, system: 0.069, elapsed: 23.069 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.020, elapsed: 1.201 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.918, system: 0.954, elapsed: 180.606 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.447 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.062, system: 1.112, elapsed: 210.801 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.030, elapsed: 4.729 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.612, system: 0.060, elapsed: 19.411 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.016, elapsed: 0.914 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.611, system: 0.826, elapsed: 110.245 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.163 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.710, system: 0.955, elapsed: 136.622 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.516, system: 0.031, elapsed: 1.983 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.553, system: 0.052, elapsed: 13.635 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.015, elapsed: 1.104 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.871, system: 0.890, elapsed: 154.650 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.005, elapsed: 0.202 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.262, system: 0.328, elapsed: 1.192 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.273, system: 1.347, elapsed: 173.579 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.031, elapsed: 2.530 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.511, system: 0.089, elapsed: 17.790 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.017, elapsed: 1.184 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.893, system: 0.938, elapsed: 174.893 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.005, elapsed: 0.382 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.557, system: 0.633, elapsed: 46.281 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.612, system: 1.746, elapsed: 244.390 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64