CRAN Package Check Results for Maintainer ‘Søren Højsgaard <sorenh at math.aau.dk>’

Last updated on 2024-06-01 00:54:22 CEST.

Package WARN NOTE OK
doBy 2 4 7
geeasy 13
geepack 13
gRain 2 10
gRbase 2 3 7
gRc 13
gRim 9 3
pbkrtest 12

Package doBy

Current CRAN status: WARN: 2, NOTE: 4, OK: 7

Version: 4.6.21
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘doby.rnw’ using knitr Error: processing vignette 'doby.rnw' failed with diagnostics: Running 'texi2dvi' on 'doby.tex' failed. LaTeX errors: ! Undefined control sequence. l.140 \hldef {> }\hlkwd{head}\hldef{(mtcars)} ? ! Emergency stop. ! Emergency stop. l.140 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘doby.rnw’ --- re-building ‘linest_lsmeans.rnw’ using knitr Error: processing vignette 'linest_lsmeans.rnw' failed with diagnostics: Running 'texi2dvi' on 'linest_lsmeans.tex' failed. LaTeX errors: ! Undefined control sequence. l.159 \hldef {> }\hlkwd{lm}\hldef{( y} \hlopt{~} \hldef{treat} \hlopt{+} \hld... ? ! Emergency stop. l.159 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘linest_lsmeans.rnw’ --- re-building ‘model_stability.rmd’ using knitr ** Processing: figure/unnamed-chunk-8-1.png 504x504 pixels, 8 bits/pixel, 254 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4409 bytes Input file size = 5261 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3617 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3614 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3614 Output IDAT size = 3614 bytes (795 bytes decrease) Output file size = 3692 bytes (1569 bytes = 29.82% decrease) ** Processing: figure/unnamed-chunk-9-1.png 504x504 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 8156 bytes Input file size = 9014 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6413 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6413 Output IDAT size = 6413 bytes (1743 bytes decrease) Output file size = 6491 bytes (2523 bytes = 27.99% decrease) --- finished re-building ‘model_stability.rmd’ --- re-building ‘section_fun.rmd’ using knitr --- finished re-building ‘section_fun.rmd’ SUMMARY: processing the following files failed: ‘doby.rnw’ ‘linest_lsmeans.rnw’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 4.6.21
Check: installed package size
Result: NOTE installed size is 5.7Mb sub-directories of 1Mb or more: data 4.7Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package geeasy

Current CRAN status: OK: 13

Package geepack

Current CRAN status: OK: 13

Package gRain

Current CRAN status: WARN: 2, OK: 10

Version: 1.4.1
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘grain_intro.Rnw’ using knitr Error: processing vignette 'grain_intro.Rnw' failed with diagnostics: Running 'texi2dvi' on 'grain_intro.tex' failed. LaTeX errors: ! Undefined control sequence. l.291 \hldef {yn} \hlkwb{<-} \hlkwd{c}\hldef{(}\hlsng{"yes"}\hldef{,}\hlsng{"... ? ! Emergency stop. l.291 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘grain_intro.Rnw’ SUMMARY: processing the following file failed: ‘grain_intro.Rnw’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Package gRbase

Current CRAN status: WARN: 2, NOTE: 3, OK: 7

Version: 2.0.1
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘arrays.Rnw’ using knitr Error: processing vignette 'arrays.Rnw' failed with diagnostics: Running 'texi2dvi' on 'arrays.tex' failed. LaTeX errors: ! Undefined control sequence. l.181 \hldef {hec} \hlkwb{<-} \hlkwd{c}\hldef{(}\hlnum{32}\hldef{,} \hlnum{53... ? ! Emergency stop. l.181 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘arrays.Rnw’ --- re-building ‘graphs_chapter.Rnw’ using knitr Error: processing vignette 'graphs_chapter.Rnw' failed with diagnostics: Running 'texi2dvi' on 'graphs_chapter.tex' failed. LaTeX errors: ! Undefined control sequence. l.200 \hlkwd{library}\hldef {(gRbase)} ? ! Emergency stop. ! Emergency stop. l.200 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘graphs_chapter.Rnw’ SUMMARY: processing the following files failed: ‘arrays.Rnw’ ‘graphs_chapter.Rnw’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 2.0.1
Check: installed package size
Result: NOTE installed size is 11.8Mb sub-directories of 1Mb or more: data 1.3Mb libs 9.3Mb Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package gRc

Current CRAN status: OK: 13

Package gRim

Current CRAN status: NOTE: 9, OK: 3

Version: 0.3.0
Check: Rd files
Result: NOTE checkRd: (-1) testadd.Rd:34: Lost braces; missing escapes or markup? 34 | Let M0 be the model and e={u,v} be an edge and let M1 be | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64

Package pbkrtest

Current CRAN status: OK: 12