CRAN Package Check Results for Package vcfR

Last updated on 2026-08-02 12:52:27 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.16.0 100.40 195.96 296.36 NOTE
r-devel-linux-x86_64-debian-gcc 1.16.0 81.26 155.64 236.90 NOTE
r-devel-linux-x86_64-fedora-clang 1.16.0 169.00 311.72 480.72 OK
r-devel-linux-x86_64-fedora-gcc 1.16.0 88.00 136.40 224.40 NOTE
r-devel-windows-x86_64 1.16.0 113.00 247.00 360.00 NOTE
r-patched-linux-x86_64 1.16.0 107.42 188.30 295.72 OK
r-release-linux-x86_64 1.16.0 112.92 187.64 300.56 OK
r-release-macos-arm64 1.16.0 21.00 42.00 63.00 OK
r-release-macos-x86_64 1.16.0 58.00 184.00 242.00 OK
r-release-windows-x86_64 1.16.0 120.00 247.00 367.00 OK
r-oldrel-macos-arm64 1.16.0 17.00 49.00 66.00 OK
r-oldrel-macos-x86_64 1.16.0 66.00 332.00 398.00 OK
r-oldrel-windows-x86_64 1.16.0 137.00 333.00 470.00 OK

Check Details

Version: 1.16.0
Check: R code for possible problems
Result: NOTE Found calls to structure() using deprecated special names: vcfR/tests/testthat/test_genetic_diff.R (.Dim: 2, .Dimnames: 2, .Label: 1) vcfR/tests/testthat/test_genotype_matrix_functions.R (.Dim: 1, .Dimnames: 1) '.Dim' should be changed to 'dim'. '.Dimnames' should be changed to 'dimnames'. '.Label' should be changed to 'levels'. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 1.16.0
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0Cnfe9’ ‘~/tmp/scratch/Rtmp1VO4WY’ ‘~/tmp/scratch/Rtmp2I6j0l’ ‘~/tmp/scratch/Rtmp3iMg6g’ ‘~/tmp/scratch/Rtmp48li0g’ ‘~/tmp/scratch/Rtmp4AMDQ2’ ‘~/tmp/scratch/Rtmp4M5jwB’ ‘~/tmp/scratch/Rtmp4MmFAX’ ‘~/tmp/scratch/Rtmp4ecjhk’ ‘~/tmp/scratch/Rtmp5EwE67’ ‘~/tmp/scratch/Rtmp5GzkRQ’ ‘~/tmp/scratch/Rtmp5IWPaa’ ‘~/tmp/scratch/Rtmp5L4Q4K’ ‘~/tmp/scratch/Rtmp5nHYwF’ ‘~/tmp/scratch/Rtmp5zFXpq’ ‘~/tmp/scratch/Rtmp61cup7’ ‘~/tmp/scratch/Rtmp6AmtMz’ ‘~/tmp/scratch/Rtmp6rSRuk’ ‘~/tmp/scratch/Rtmp70VRcb’ ‘~/tmp/scratch/Rtmp7baj6f’ ‘~/tmp/scratch/Rtmp81EpYt’ ‘~/tmp/scratch/Rtmp8FrRFg’ ‘~/tmp/scratch/Rtmp99Qzrt’ ‘~/tmp/scratch/RtmpA67VBi’ ‘~/tmp/scratch/RtmpAEVDUt’ ‘~/tmp/scratch/RtmpAJlwn8’ ‘~/tmp/scratch/RtmpATzQv4’ ‘~/tmp/scratch/RtmpBM9vzo’ ‘~/tmp/scratch/RtmpBuf8qn’ ‘~/tmp/scratch/RtmpC4pnAP’ ‘~/tmp/scratch/RtmpCHTwzc’ ‘~/tmp/scratch/RtmpCIYD5z’ ‘~/tmp/scratch/RtmpCxY6TX’ ‘~/tmp/scratch/RtmpDGwQ2T’ ‘~/tmp/scratch/RtmpDzippM’ ‘~/tmp/scratch/RtmpE45t3Y’ ‘~/tmp/scratch/RtmpE5lIxt’ ‘~/tmp/scratch/RtmpEctpy9’ ‘~/tmp/scratch/RtmpEo1J55’ ‘~/tmp/scratch/RtmpF6iiRC’ ‘~/tmp/scratch/RtmpFZdh40’ ‘~/tmp/scratch/RtmpG0p3B0’ ‘~/tmp/scratch/RtmpG4KTbk’ ‘~/tmp/scratch/RtmpG9XQxp’ ‘~/tmp/scratch/RtmpGAg7N8’ ‘~/tmp/scratch/RtmpGaWaGu’ ‘~/tmp/scratch/RtmpGag2cS’ ‘~/tmp/scratch/RtmpGeBz3Y’ ‘~/tmp/scratch/RtmpGldxCJ’ ‘~/tmp/scratch/RtmpGmrx7I’ ‘~/tmp/scratch/RtmpGn7AXx’ ‘~/tmp/scratch/RtmpH59HcN’ ‘~/tmp/scratch/RtmpHEkkpW’ ‘~/tmp/scratch/RtmpHKHecR’ ‘~/tmp/scratch/RtmpHL8hu2’ ‘~/tmp/scratch/RtmpHPAKWX’ ‘~/tmp/scratch/RtmpI10rAw’ ‘~/tmp/scratch/RtmpI1A6ZB’ ‘~/tmp/scratch/RtmpIAxSXq’ ‘~/tmp/scratch/RtmpIglgvP’ ‘~/tmp/scratch/RtmpJQKqcS’ ‘~/tmp/scratch/RtmpKUuaxU’ ‘~/tmp/scratch/RtmpKVTVst’ ‘~/tmp/scratch/RtmpKvH2t4’ ‘~/tmp/scratch/RtmpL9y0hQ’ ‘~/tmp/scratch/RtmpLMNIpW’ ‘~/tmp/scratch/RtmpLaVlr7’ ‘~/tmp/scratch/RtmpLaWTgb’ ‘~/tmp/scratch/RtmpM2kTx7’ ‘~/tmp/scratch/RtmpMJELj3’ ‘~/tmp/scratch/RtmpML5MBL’ ‘~/tmp/scratch/RtmpNPi831’ ‘~/tmp/scratch/RtmpNZwDDo’ ‘~/tmp/scratch/RtmpNdM3yu’ ‘~/tmp/scratch/RtmpONqfst’ ‘~/tmp/scratch/RtmpOURZ6w’ ‘~/tmp/scratch/RtmpOcjrYG’ ‘~/tmp/scratch/RtmpOn9fiW’ ‘~/tmp/scratch/RtmpOxvdUo’ ‘~/tmp/scratch/RtmpPCVhBF’ ‘~/tmp/scratch/RtmpPIZCqe’ ‘~/tmp/scratch/RtmpQSzS8a’ ‘~/tmp/scratch/RtmpQuRGeP’ ‘~/tmp/scratch/RtmpR4nlqy’ ‘~/tmp/scratch/RtmpSYjvgy’ ‘~/tmp/scratch/RtmpSYxcPM’ ‘~/tmp/scratch/RtmpSaKRMK’ ‘~/tmp/scratch/RtmpT1Yu5p’ ‘~/tmp/scratch/RtmpTCbAKo’ ‘~/tmp/scratch/RtmpUBEnfE’ ‘~/tmp/scratch/RtmpUfF4LG’ ‘~/tmp/scratch/RtmpVJw0gQ’ ‘~/tmp/scratch/RtmpVip4lH’ ‘~/tmp/scratch/RtmpWTJElv’ ‘~/tmp/scratch/RtmpWTwSlb’ ‘~/tmp/scratch/RtmpWcpRi2’ ‘~/tmp/scratch/RtmpWix89w’ ‘~/tmp/scratch/RtmpXPJqz1’ ‘~/tmp/scratch/RtmpXz6CLO’ ‘~/tmp/scratch/RtmpYGFj8j’ ‘~/tmp/scratch/RtmpYQmYCe’ ‘~/tmp/scratch/RtmpYR8KhL’ ‘~/tmp/scratch/RtmpYiNqHa’ ‘~/tmp/scratch/RtmpYuoWS4’ ‘~/tmp/scratch/RtmpZpEWfZ’ ‘~/tmp/scratch/RtmpaMYGQ3’ ‘~/tmp/scratch/RtmpanzPQz’ ‘~/tmp/scratch/Rtmpb0z76u’ ‘~/tmp/scratch/RtmpbdtuiN’ ‘~/tmp/scratch/Rtmpbg2OtF’ ‘~/tmp/scratch/RtmpbsAJXp’ ‘~/tmp/scratch/RtmpdDn4TO’ ‘~/tmp/scratch/RtmpdJiacQ’ ‘~/tmp/scratch/RtmpdaDK0v’ ‘~/tmp/scratch/RtmpeShm8N’ ‘~/tmp/scratch/Rtmpepoxi1’ ‘~/tmp/scratch/RtmpfI95sr’ ‘~/tmp/scratch/RtmpfVInW1’ ‘~/tmp/scratch/RtmpgDqMkm’ ‘~/tmp/scratch/RtmphzDKbI’ ‘~/tmp/scratch/Rtmpi9NZJV’ ‘~/tmp/scratch/RtmpiIrL6n’ ‘~/tmp/scratch/RtmpiY6eFo’ ‘~/tmp/scratch/RtmpinedJw’ ‘~/tmp/scratch/RtmpirnSpS’ ‘~/tmp/scratch/RtmpisTsYy’ ‘~/tmp/scratch/RtmpjBR0Rr’ ‘~/tmp/scratch/RtmpjrrpFN’ ‘~/tmp/scratch/RtmpkGKd4j’ ‘~/tmp/scratch/RtmpkPXLJB’ ‘~/tmp/scratch/Rtmpl0437p’ ‘~/tmp/scratch/RtmplffYUu’ ‘~/tmp/scratch/RtmpmX22hW’ ‘~/tmp/scratch/RtmpmZOkUc’ ‘~/tmp/scratch/RtmpmsdXf2’ ‘~/tmp/scratch/Rtmpmzyiqh’ ‘~/tmp/scratch/RtmpnQyjaD’ ‘~/tmp/scratch/RtmpnVSFn4’ ‘~/tmp/scratch/RtmpocWZZr’ ‘~/tmp/scratch/RtmponjO40’ ‘~/tmp/scratch/RtmpotIgLv’ ‘~/tmp/scratch/RtmppATHlk’ ‘~/tmp/scratch/RtmppZwPnZ’ ‘~/tmp/scratch/RtmpqJuLkV’ ‘~/tmp/scratch/Rtmpqzfs2h’ ‘~/tmp/scratch/RtmprAIKpW’ ‘~/tmp/scratch/RtmprBcDHD’ ‘~/tmp/scratch/RtmprVjIts’ ‘~/tmp/scratch/RtmpstlkZy’ ‘~/tmp/scratch/RtmptCQa4v’ ‘~/tmp/scratch/Rtmptm8Vyg’ ‘~/tmp/scratch/RtmpuD7d44’ ‘~/tmp/scratch/RtmpuUXel7’ ‘~/tmp/scratch/RtmpuX1sOa’ ‘~/tmp/scratch/Rtmpv1bWOY’ ‘~/tmp/scratch/Rtmpv2P3z5’ ‘~/tmp/scratch/Rtmpv6BiLc’ ‘~/tmp/scratch/Rtmpw8C8WP’ ‘~/tmp/scratch/RtmpwJZ7xd’ ‘~/tmp/scratch/RtmpwOpchc’ ‘~/tmp/scratch/Rtmpx7knlH’ ‘~/tmp/scratch/RtmpxSSTch’ ‘~/tmp/scratch/RtmpxXp39h’ ‘~/tmp/scratch/RtmpxpeGD9’ ‘~/tmp/scratch/RtmpzGOFWV’ ‘~/tmp/scratch/RtmpzfQkUN’ ‘~/tmp/scratch/RtmpzjxoRH’ ‘~/tmp/scratch/xvfb-run.01RgM4’ ‘~/tmp/scratch/xvfb-run.0EWJr0’ ‘~/tmp/scratch/xvfb-run.0H5CcV’ ‘~/tmp/scratch/xvfb-run.2WrZEU’ ‘~/tmp/scratch/xvfb-run.4tTApA’ ‘~/tmp/scratch/xvfb-run.55fIiR’ ‘~/tmp/scratch/xvfb-run.5gohJC’ ‘~/tmp/scratch/xvfb-run.6MZcY9’ ‘~/tmp/scratch/xvfb-run.6rHt44’ ‘~/tmp/scratch/xvfb-run.76AVpf’ ‘~/tmp/scratch/xvfb-run.8xvDw9’ ‘~/tmp/scratch/xvfb-run.ABqFcQ’ ‘~/tmp/scratch/xvfb-run.B3HNIq’ ‘~/tmp/scratch/xvfb-run.B6mpbT’ ‘~/tmp/scratch/xvfb-run.CB3Gz2’ ‘~/tmp/scratch/xvfb-run.CLe8bd’ ‘~/tmp/scratch/xvfb-run.ELlXnn’ ‘~/tmp/scratch/xvfb-run.GNs5Tw’ ‘~/tmp/scratch/xvfb-run.GeTo02’ ‘~/tmp/scratch/xvfb-run.H2Fc0N’ ‘~/tmp/scratch/xvfb-run.I1O62d’ ‘~/tmp/scratch/xvfb-run.JLwdLT’ ‘~/tmp/scratch/xvfb-run.KmZvPC’ ‘~/tmp/scratch/xvfb-run.NAoigJ’ ‘~/tmp/scratch/xvfb-run.NDZbyb’ ‘~/tmp/scratch/xvfb-run.NQMIAX’ ‘~/tmp/scratch/xvfb-run.OTWKey’ ‘~/tmp/scratch/xvfb-run.P3Lm8D’ ‘~/tmp/scratch/xvfb-run.P5WlVa’ ‘~/tmp/scratch/xvfb-run.PuiM1p’ ‘~/tmp/scratch/xvfb-run.Pz2Zeo’ ‘~/tmp/scratch/xvfb-run.QZf33O’ ‘~/tmp/scratch/xvfb-run.QakaXD’ ‘~/tmp/scratch/xvfb-run.R9dofr’ ‘~/tmp/scratch/xvfb-run.RO0GLx’ ‘~/tmp/scratch/xvfb-run.RQYWVZ’ ‘~/tmp/scratch/xvfb-run.UUhDdu’ ‘~/tmp/scratch/xvfb-run.UvKiOY’ ‘~/tmp/scratch/xvfb-run.VLNr1Q’ ‘~/tmp/scratch/xvfb-run.XjvUS6’ ‘~/tmp/scratch/xvfb-run.Y3ihcV’ ‘~/tmp/scratch/xvfb-run.ZukmuT’ ‘~/tmp/scratch/xvfb-run.ZyE9ES’ ‘~/tmp/scratch/xvfb-run.aWqfrH’ ‘~/tmp/scratch/xvfb-run.bAnGpi’ ‘~/tmp/scratch/xvfb-run.bUI7gx’ ‘~/tmp/scratch/xvfb-run.cgszNM’ ‘~/tmp/scratch/xvfb-run.dJBlyj’ ‘~/tmp/scratch/xvfb-run.dzwfmE’ ‘~/tmp/scratch/xvfb-run.eOucmx’ ‘~/tmp/scratch/xvfb-run.elGzQY’ ‘~/tmp/scratch/xvfb-run.hiPFZJ’ ‘~/tmp/scratch/xvfb-run.ijyPSh’ ‘~/tmp/scratch/xvfb-run.iy3vt2’ ‘~/tmp/scratch/xvfb-run.jWBFuG’ ‘~/tmp/scratch/xvfb-run.kAh7Su’ ‘~/tmp/scratch/xvfb-run.kENnxu’ ‘~/tmp/scratch/xvfb-run.kdJkzY’ ‘~/tmp/scratch/xvfb-run.mQlAK9’ ‘~/tmp/scratch/xvfb-run.mgdj2s’ ‘~/tmp/scratch/xvfb-run.nF0IRu’ ‘~/tmp/scratch/xvfb-run.nUyiNo’ ‘~/tmp/scratch/xvfb-run.ozNaw4’ ‘~/tmp/scratch/xvfb-run.ozlxmd’ ‘~/tmp/scratch/xvfb-run.pBC3DZ’ ‘~/tmp/scratch/xvfb-run.psNwiG’ ‘~/tmp/scratch/xvfb-run.pufU3g’ ‘~/tmp/scratch/xvfb-run.qToRg9’ ‘~/tmp/scratch/xvfb-run.qwy40r’ ‘~/tmp/scratch/xvfb-run.r7O6PC’ ‘~/tmp/scratch/xvfb-run.rCaJUt’ ‘~/tmp/scratch/xvfb-run.s9H6xk’ ‘~/tmp/scratch/xvfb-run.y47SCs’ ‘~/tmp/scratch/xvfb-run.yGgVsO’ ‘~/tmp/scratch/xvfb-run.ya9Zbo’ Flavor: r-devel-linux-x86_64-debian-gcc